DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PTTST
Uniprot ID:
Q96GD3
Source protein:
Polycomb protein SCMH1
Source gene:
SCMH1
Class:
DEG_SPOP_SBC_1
Location:
330:334
E3 ligase:
SPOP
DEGRON score:
0.7052
ASA_SCORE:
84.18
COIL:
0.9412
CONS_SCORE:
0.4344
DSS_SCORE:
0.8244
HELIX:
0.0194
FCONS_SCORE:
0.9385
RIG_SCORE:
0.5151
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S325N
DO233652
GACA
ICGC
PTTST
DEG_SPOP_SBC_1
0.1944
p.G324S
DO233752
GACA
ICGC
PTTST
DEG_SPOP_SBC_1
0.1667
p.L333M
DO228978
LICA
ICGC
PTTST
DEG_SPOP_SBC_1
0.711
p.T342N
DO228985
LICA
ICGC
PTTST
DEG_SPOP_SBC_1
0.1111
p.P323S
DO222494
MELA
ICGC
PTTST
DEG_SPOP_SBC_1
0.1389
p.S333N
SIDM00216
Colorectal Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7069
p.S333N
ACH-000989
Colon/Colorectal Cancer
CCLE
PTTST
DEG_SPOP_SBC_1
0.7069
p.S333N
SNU-175
large_intestine
COSMIC
PTTST
DEG_SPOP_SBC_1
0.7069
p.S343N
SNU-175
large_intestine
COSMIC
PTTST
DEG_SPOP_SBC_1
0.0833
p.R342H
5637
urinary_tract
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1111
p.R343L
HeLa
cervix
COSMIC
PTTST
DEG_SPOP_SBC_1
0.0833
p.A336T
ECC12
stomach
COSMIC
PTTST
DEG_SPOP_SBC_1
0.2778
p.A329V
RKO
large_intestine
COSMIC
PTTST
DEG_SPOP_SBC_1
0.3056
p.R328H
5637
urinary_tract
COSMIC
PTTST
DEG_SPOP_SBC_1
0.2778
p.K328E
SW48
large_intestine
COSMIC
PTTST
DEG_SPOP_SBC_1
0.2778
p.A343V
RKO
large_intestine
COSMIC
PTTST
DEG_SPOP_SBC_1
0.0833
Drug responses associated with SCMH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
885:889
PTTST
SPOP
0.9985
More...
P16070
CD44 antigen
DEG_SPOP_SBC_1
527:531
PTTST
SPOP
0.9979
More...
P16150
Leukosialin
DEG_SPOP_SBC_1
234:238
PTTST
SPOP
0.8906
More...
P51532
Transcription activator BRG1
DEG_SPOP_SBC_1
1424:1428
PTTST
SPOP
0.6708
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3128:3132
PTTST
SPOP
0.5488
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3811:3815
PTTST
SPOP
0.6407
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3827:3831
PTTST
SPOP
0.5591
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SPOP_SBC_1
1621:1625
PTTST
SPOP
0.9682
More...
Q6ZSZ6
Teashirt homolog 1
DEG_SPOP_SBC_1
170:174
PTTST
SPOP
0.7765
More...
Q8IZA0
Dyslexia-associated protein KIAA0319-like protein
DEG_SPOP_SBC_1
422:426
PTTST
SPOP
0.7723
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_SPOP_SBC_1
1097:1101
PTTST
SPOP
0.9044
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12198:12202
PTTST
SPOP
0.9133
More...
Q96GD3
Polycomb protein SCMH1
DEG_SPOP_SBC_1
330:334
PTTST
SPOP
0.7052
More...
Q99607
ETS-related transcription factor Elf-4
DEG_SPOP_SBC_1
375:379
PTTST
SPOP
0.9537
More...
Q99715
Collagen alpha-1
DEG_SPOP_SBC_1
825:829
PTTST
SPOP
0.9873
More...
A6NHQ4
Elongin BC and Polycomb repressive complex 2-associated protein
DEG_SPOP_SBC_1
308:312
PTTST
SPOP
0.9826
More...