DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PTTST
Uniprot ID:
P51532
Source protein:
Transcription activator BRG1
Source gene:
SMARCA4
Class:
DEG_SPOP_SBC_1
Location:
1424:1428
E3 ligase:
SPOP
DEGRON score:
0.6708
ASA_SCORE:
87.04
COIL:
0.8942
CONS_SCORE:
0.3087
DSS_SCORE:
0.7631
HELIX:
0.088
FCONS_SCORE:
0.9707
RIG_SCORE:
0.5467
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1428H
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
PTTST
DEG_SPOP_SBC_1
0.8244
p.P1426L
AN3-CA
endometrium
COSMIC
PTTST
DEG_SPOP_SBC_1
0.7582
p.N1424H
T-T
oesophagus
COSMIC
PTTST
DEG_SPOP_SBC_1
0.7423
p.P1425Q
DO37456
SKCM
ICGC
PTTST
DEG_SPOP_SBC_1
0.7035
p.P1424S
TCGA-EE-A2A6
SKCM
TCGA
PTTST
DEG_SPOP_SBC_1
0.6752
p.P1425S
DO41014
UCEC
ICGC
PTTST
DEG_SPOP_SBC_1
0.6752
p.P1425S
PCI-4B
upper_aerodigestive_tract
COSMIC
PTTST
DEG_SPOP_SBC_1
0.6752
p.D1417E
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PTTST
DEG_SPOP_SBC_1
0.5833
p.D1417Y
DMS-53
lung
COSMIC
PTTST
DEG_SPOP_SBC_1
0.5833
p.R1429H
DO228338
MALY
ICGC
PTTST
DEG_SPOP_SBC_1
0.3056
p.R1429H
SIDM00948
Burkitt's Lymphoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.3056
p.R1429H
ACH-002232
Lymphoma
CCLE
PTTST
DEG_SPOP_SBC_1
0.3056
p.R1429H
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
PTTST
DEG_SPOP_SBC_1
0.3056
p.R1431H
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
PTTST
DEG_SPOP_SBC_1
0.25
p.D1418N
TCGA-EE-A29E
SKCM
TCGA
PTTST
DEG_SPOP_SBC_1
0.1667
p.D1418N
IGROV-1
ovary
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1667
p.A1438V
DO37531
SKCM
ICGC
PTTST
DEG_SPOP_SBC_1
0.1667
p.A1438V
DO37404
SKCM
ICGC
PTTST
DEG_SPOP_SBC_1
0.1667
p.D1418Y
SIDM00523
Small Cell Lung Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.1667
p.D1418Y
ACH-000698
Lung Cancer
CCLE
PTTST
DEG_SPOP_SBC_1
0.1667
p.D1418Y
DMS-53
lung
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1667
p.D1418E
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1667
p.A1438G
SNU-175
large_intestine
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1667
p.A1435G
SNU-175
large_intestine
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1389
p.E1436D
TCGA-FJ-A3ZF
BLCA
TCGA
PTTST
DEG_SPOP_SBC_1
0.1111
Showing 1 to 25 of 32 entries
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Drug responses associated with SMARCA4 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00814
ACC|adrenal_gland
p.Q164* (No)
GDSC
PFI-3
48.5692
SIDM00814
ACC|adrenal_gland
p.Q164* (No)
GDSC
PFI3
22.895
SIDM01086
ALL|leukemia
p.R167W (No)
GDSC
PFI-3
42.4835
SIDM01086
ALL|leukemia
p.R167W (No)
GDSC
PFI3
91.199
SIDM00145
ALL|lymphoblastic_leukemia
p.P109fs*194 (No)
GDSC
PFI-3
37.5832
SIDM00145
ALL|lymphoblastic_leukemia
p.P109fs*194 (No)
GDSC
PFI3
137.96
SIDM01007
ALL|lymphoblastic_leukemia
p.E590K (No)
GDSC
PFI-3
71.009
SIDM01007
ALL|lymphoblastic_leukemia
p.E590K (No)
GDSC
PFI3
44.829
SIDM01007
ALL|lymphoblastic_leukemia
p.S655P (No)
GDSC
PFI-3
71.009
SIDM01007
ALL|lymphoblastic_leukemia
p.S655P (No)
GDSC
PFI3
44.829
SIDM00364
ALL|lymphoblastic_leukemia
p.A161T (No)
GDSC
PFI-3
40.2331
SIDM00364
ALL|lymphoblastic_leukemia
p.A161T (No)
GDSC
PFI3
54.548
SIDM00451
ALL|lymphoblastic_T_cell_leukaemia
p.L1138P (No)
GDSC
PFI-3
87.363
SIDM00451
ALL|lymphoblastic_T_cell_leukaemia
p.L1138P (No)
GDSC
PFI3
142.58
SIDM00946
ALL|T_cell_leukemia
p.Q165* (No)
GDSC
PFI-3
68.7687
SIDM00946
ALL|T_cell_leukemia
p.Q165* (No)
GDSC
PFI3
72.351
SIDM00946
ALL|T_cell_leukemia
p.S1441T (No)
GDSC
PFI-3
68.7687
SIDM00946
ALL|T_cell_leukemia
p.S1441T (No)
GDSC
PFI3
72.351
SIDM00999
BLCA|bladder
p.R1203H (No)
GDSC
PFI-3
80.4018
SIDM00999
BLCA|bladder
p.R1203H (No)
GDSC
PFI3
139.3
SIDM00999
BLCA|bladder
p.R1477W (No)
GDSC
PFI-3
80.4018
SIDM00999
BLCA|bladder
p.R1477W (No)
GDSC
PFI3
139.3
SIDM00933
BRCA|breast
p.R885H (No)
GDSC
PFI-3
81.8615
SIDM00933
BRCA|breast
p.R885H (No)
GDSC
PFI3
156.34
SIDM00889
CESC|cervix
p.N772_L773insN (No)
GDSC
PFI-3
59.1782
Showing 1 to 25 of 230 entries
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All proteins holding degron of PTTST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_SPOP_SBC_1
1097:1101
PTTST
SPOP
0.9044
More...
P16070
CD44 antigen
DEG_SPOP_SBC_1
527:531
PTTST
SPOP
0.9979
More...
Q99715
Collagen alpha-1
DEG_SPOP_SBC_1
825:829
PTTST
SPOP
0.9873
More...
Q8IZA0
Dyslexia-associated protein KIAA0319-like protein
DEG_SPOP_SBC_1
422:426
PTTST
SPOP
0.7723
More...
A6NHQ4
Elongin BC and Polycomb repressive complex 2-associated protein
DEG_SPOP_SBC_1
308:312
PTTST
SPOP
0.9826
More...
Q99607
ETS-related transcription factor Elf-4
DEG_SPOP_SBC_1
375:379
PTTST
SPOP
0.9537
More...
P16150
Leukosialin
DEG_SPOP_SBC_1
234:238
PTTST
SPOP
0.8906
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SPOP_SBC_1
1621:1625
PTTST
SPOP
0.9682
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12198:12202
PTTST
SPOP
0.9133
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3128:3132
PTTST
SPOP
0.5488
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3811:3815
PTTST
SPOP
0.6407
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3827:3831
PTTST
SPOP
0.5591
More...
Q96GD3
Polycomb protein SCMH1
DEG_SPOP_SBC_1
330:334
PTTST
SPOP
0.7052
More...
Q6ZSZ6
Teashirt homolog 1
DEG_SPOP_SBC_1
170:174
PTTST
SPOP
0.7765
More...
P51532
Transcription activator BRG1
DEG_SPOP_SBC_1
1424:1428
PTTST
SPOP
0.6708
More...
P13611
Versican core protein
DEG_SPOP_SBC_1
885:889
PTTST
SPOP
0.9985
More...
Showing 1 to 16 of 16 entries
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