DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PTTST
Uniprot ID:
Q99715
Source protein:
Collagen alpha-1
Source gene:
COL12A1
Class:
DEG_SPOP_SBC_1
Location:
825:829
E3 ligase:
SPOP
DEGRON score:
0.9873
ASA_SCORE:
55.68
COIL:
0.7598
CONS_SCORE:
0.5304
DSS_SCORE:
0.5341
HELIX:
0.0192
FCONS_SCORE:
0.9986
RIG_SCORE:
0.7343
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V822F
TCGA-86-8073
LUAD
TCGA
PTTST
DEG_SPOP_SBC_1
0.25
p.V822F
DO23624
LUAD
ICGC
PTTST
DEG_SPOP_SBC_1
0.25
p.P838T
TCGA-A6-5661
COAD
TCGA
PTTST
DEG_SPOP_SBC_1
0.0833
p.P838T
DO8634
COAD
ICGC
PTTST
DEG_SPOP_SBC_1
0.0833
p.K831T
TCGA-AA-3848
COAD
TCGA
PTTST
DEG_SPOP_SBC_1
0.2778
p.K831T
DO9740
COAD
ICGC
PTTST
DEG_SPOP_SBC_1
0.2778
p.T827M
TCGA-AN-A049
BRCA
TCGA
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
DO4305
BRCA
ICGC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM00373
Endometrial Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM00578
Neuroblastoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM01197
Colorectal Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM00304
Ovarian Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM00592
Oral Cavity Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM01024
Esophageal Squamous Cell Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM01029
Esophageal Squamous Cell Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM00217
Colorectal Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM00604
Oral Cavity Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM01498
Acute Myeloid Leukemia
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM01779
Gastric Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM00016
Neuroblastoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.T827M
SIDM01442
Glioma
GDSC
PTTST
DEG_SPOP_SBC_1
0.7423
p.P825H
TCGA-BR-6452
STAD
TCGA
PTTST
DEG_SPOP_SBC_1
0.7694
p.P825H
TCGA-EE-A3AD
SKCM
TCGA
PTTST
DEG_SPOP_SBC_1
0.7694
p.P825H
DO37707
SKCM
ICGC
PTTST
DEG_SPOP_SBC_1
0.7694
p.P825H
DO38404
STAD
ICGC
PTTST
DEG_SPOP_SBC_1
0.7694
p.G839R
TCGA-D3-A1Q5
SKCM
TCGA
PTTST
DEG_SPOP_SBC_1
0.0556
p.G839R
DO37827
SKCM
ICGC
PTTST
DEG_SPOP_SBC_1
0.0556
p.M830T
TCGA-DD-A3A9
LIHC
TCGA
PTTST
DEG_SPOP_SBC_1
0.3056
p.M830T
DO44888
LIHC
ICGC
PTTST
DEG_SPOP_SBC_1
0.3056
p.P838Q
DO229022
LICA
ICGC
PTTST
DEG_SPOP_SBC_1
0.0833
p.P817T
SIDM00741
Small Cell Lung Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.1111
p.P817T
ACH-000431
Lung Cancer
CCLE
PTTST
DEG_SPOP_SBC_1
0.1111
p.P817T
NCI-H1694
lung
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1111
p.W834S
SIDM00966
Ovarian Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.1944
p.W834S
ACH-002182
Ovarian Cancer
CCLE
PTTST
DEG_SPOP_SBC_1
0.1944
p.W834S
OVCA433
ovary
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1944
p.S837N
LS-411N
large_intestine
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1111
p.P819S
SNU-1040
large_intestine
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1667
p.G822V
NCI-H2196
lung
COSMIC
PTTST
DEG_SPOP_SBC_1
0.25
Drug responses associated with COL12A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
885:889
PTTST
SPOP
0.9985
More...
P16070
CD44 antigen
DEG_SPOP_SBC_1
527:531
PTTST
SPOP
0.9979
More...
P16150
Leukosialin
DEG_SPOP_SBC_1
234:238
PTTST
SPOP
0.8906
More...
P51532
Transcription activator BRG1
DEG_SPOP_SBC_1
1424:1428
PTTST
SPOP
0.6708
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3128:3132
PTTST
SPOP
0.5488
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3811:3815
PTTST
SPOP
0.6407
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3827:3831
PTTST
SPOP
0.5591
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SPOP_SBC_1
1621:1625
PTTST
SPOP
0.9682
More...
Q6ZSZ6
Teashirt homolog 1
DEG_SPOP_SBC_1
170:174
PTTST
SPOP
0.7765
More...
Q8IZA0
Dyslexia-associated protein KIAA0319-like protein
DEG_SPOP_SBC_1
422:426
PTTST
SPOP
0.7723
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_SPOP_SBC_1
1097:1101
PTTST
SPOP
0.9044
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12198:12202
PTTST
SPOP
0.9133
More...
Q96GD3
Polycomb protein SCMH1
DEG_SPOP_SBC_1
330:334
PTTST
SPOP
0.7052
More...
Q99607
ETS-related transcription factor Elf-4
DEG_SPOP_SBC_1
375:379
PTTST
SPOP
0.9537
More...
Q99715
Collagen alpha-1
DEG_SPOP_SBC_1
825:829
PTTST
SPOP
0.9873
More...
A6NHQ4
Elongin BC and Polycomb repressive complex 2-associated protein
DEG_SPOP_SBC_1
308:312
PTTST
SPOP
0.9826
More...