DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVTTT
Uniprot ID:
O43283
Source protein:
Mitogen-activated protein kinase kinase kinase 13
Source gene:
MAP3K13
Class:
DEG_SPOP_SBC_1
Location:
63:67
E3 ligase:
SPOP
DEGRON score:
0.9958
ASA_SCORE:
81.04
COIL:
0.7906
CONS_SCORE:
0.22
DSS_SCORE:
0.4682
HELIX:
0.0516
FCONS_SCORE:
0.918
RIG_SCORE:
0.7373
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R53Q
TCGA-A5-A2K5
UCEC
TCGA
PVTTT
DEG_SPOP_SBC_1
0.0556
p.R53Q
TCGA-EO-A22U
UCEC
TCGA
PVTTT
DEG_SPOP_SBC_1
0.0556
p.R53Q
DO43755
UCEC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.0556
p.R53Q
DO41379
UCEC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.0556
p.T70M
TCGA-AN-A04C
BRCA
TCGA
PVTTT
DEG_SPOP_SBC_1
0.25
p.T70M
DO1280
BRCA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.25
p.T70M
SIDM01007
T-Lymphoblastic Leukemia
GDSC
PVTTT
DEG_SPOP_SBC_1
0.25
p.T70M
ACH-002256
Leukemia
CCLE
PVTTT
DEG_SPOP_SBC_1
0.25
p.T70M
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.25
p.P63L
TCGA-D3-A51G
SKCM
TCGA
PVTTT
DEG_SPOP_SBC_1
0.7582
p.P63L
TCGA-D3-A8GC
SKCM
TCGA
PVTTT
DEG_SPOP_SBC_1
0.7582
p.P63L
DO222662
MELA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7582
p.P63L
DO50281
SKCM
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7582
p.P63L
DO47700
SKCM
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7582
p.E58K
DO2401
BRCA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1944
p.P70L
DO10373
COAD
ICGC
PVTTT
DEG_SPOP_SBC_1
0.25
p.V64I
DO227996
COCA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.5965
p.T59M
DO229060
LICA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.6667
p.T59M
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.6667
p.S73R
DO49118
PACA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1667
p.S73I
DO232761
PBCA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1667
p.K76N
DO37881
SKCM
ICGC
PVTTT
DEG_SPOP_SBC_1
0.0833
p.D75V
SIDM00954
Breast Carcinoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.1111
p.D75V
ACH-001820
Breast Cancer
CCLE
PVTTT
DEG_SPOP_SBC_1
0.1111
p.D75V
COLO-824
breast
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.1111
p.V60L
ACH-000901
Lung Cancer
CCLE
PVTTT
DEG_SPOP_SBC_1
0.25
p.M60I
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.25
p.M60L
NB1
autonomic_ganglia
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.25
Drug responses associated with MAP3K13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NKB5
Pecanex-like protein 2
DEG_SPOP_SBC_1
2000:2004
PVTTT
SPOP
0.9571
More...
O43283
Mitogen-activated protein kinase kinase kinase 13
DEG_SPOP_SBC_1
63:67
PVTTT
SPOP
0.9958
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2870:2874
PVTTT
SPOP
0.5381
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2876:2880
PVTTT
SPOP
0.9639
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2882:2886
PVTTT
SPOP
0.8697
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2889:2893
PVTTT
SPOP
0.991
More...
P18583
Protein SON
DEG_SPOP_SBC_1
507:511
PVTTT
SPOP
0.6512
More...
P27540
Aryl hydrocarbon receptor nuclear translocator
DEG_SPOP_SBC_1
530:534
PVTTT
SPOP
0.9876
More...
P36956
Sterol regulatory element-binding protein 1
DEG_SPOP_SBC_1
224:228
PVTTT
SPOP
0.9066
More...
P49848
Transcription initiation factor TFIID subunit 6
DEG_SPOP_SBC_1
570:574
PVTTT
SPOP
0.5016
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3488:3492
PVTTT
SPOP
0.525
More...
Q14896
Myosin-binding protein C, cardiac-type
DEG_SPOP_SBC_1
955:959
PVTTT
SPOP
0.8503
More...
Q8WZ42
Titin
DEG_SPOP_SBC_1
33135:33139
PVTTT
SPOP
0.9908
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
203:207
PVTTT
SPOP
0.9927
More...
Q9Y6V0
Protein piccolo
DEG_SPOP_SBC_1
665:669
PVTTT
SPOP
0.9936
More...
Q7Z2K8
G protein-regulated inducer of neurite outgrowth 1
DEG_SPOP_SBC_1
616:620
PVTTT
SPOP
0.9985
More...