DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PVTTT
Uniprot ID:
P49848
Source protein:
Transcription initiation factor TFIID subunit 6
Source gene:
TAF6
Class:
DEG_SPOP_SBC_1
Location:
570:574
E3 ligase:
SPOP
DEGRON score:
0.5016
ASA_SCORE:
93.66
COIL:
0.8818
CONS_SCORE:
0.3593
DSS_SCORE:
0.5367
HELIX:
0.0114
FCONS_SCORE:
0.9438
RIG_SCORE:
0.7072
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P572Q
TCGA-DX-AB2G
SARC
TCGA
PVTTT
DEG_SPOP_SBC_1
0.7035
p.R561L
TCGA-ER-A19P
SKCM
TCGA
PVTTT
DEG_SPOP_SBC_1
0.0833
p.P571S
TCGA-K4-A54R
BLCA
TCGA
PVTTT
DEG_SPOP_SBC_1
0.6752
p.P571S
DO48611
BLCA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.6752
p.P566L
TCGA-XF-A9SK
BLCA
TCGA
PVTTT
DEG_SPOP_SBC_1
0.2222
p.G562S
DO223732
CESC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1111
p.P580H
DO229027
LICA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1667
p.V582I
DO23782
LUAD
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1111
p.A571T
A498
kidney
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.7139
Drug responses associated with TAF6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NKB5
Pecanex-like protein 2
DEG_SPOP_SBC_1
2000:2004
PVTTT
SPOP
0.9571
More...
O43283
Mitogen-activated protein kinase kinase kinase 13
DEG_SPOP_SBC_1
63:67
PVTTT
SPOP
0.9958
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2870:2874
PVTTT
SPOP
0.5381
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2876:2880
PVTTT
SPOP
0.9639
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2882:2886
PVTTT
SPOP
0.8697
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2889:2893
PVTTT
SPOP
0.991
More...
P18583
Protein SON
DEG_SPOP_SBC_1
507:511
PVTTT
SPOP
0.6512
More...
P27540
Aryl hydrocarbon receptor nuclear translocator
DEG_SPOP_SBC_1
530:534
PVTTT
SPOP
0.9876
More...
P36956
Sterol regulatory element-binding protein 1
DEG_SPOP_SBC_1
224:228
PVTTT
SPOP
0.9066
More...
P49848
Transcription initiation factor TFIID subunit 6
DEG_SPOP_SBC_1
570:574
PVTTT
SPOP
0.5016
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3488:3492
PVTTT
SPOP
0.525
More...
Q14896
Myosin-binding protein C, cardiac-type
DEG_SPOP_SBC_1
955:959
PVTTT
SPOP
0.8503
More...
Q8WZ42
Titin
DEG_SPOP_SBC_1
33135:33139
PVTTT
SPOP
0.9908
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
203:207
PVTTT
SPOP
0.9927
More...
Q9Y6V0
Protein piccolo
DEG_SPOP_SBC_1
665:669
PVTTT
SPOP
0.9936
More...
Q7Z2K8
G protein-regulated inducer of neurite outgrowth 1
DEG_SPOP_SBC_1
616:620
PVTTT
SPOP
0.9985
More...