DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PVTTT
Uniprot ID:
Q9Y6V0
Source protein:
Protein piccolo
Source gene:
PCLO
Class:
DEG_SPOP_SBC_1
Location:
665:669
E3 ligase:
SPOP
DEGRON score:
0.9936
ASA_SCORE:
103.14
COIL:
0.9614
CONS_SCORE:
0.3259
DSS_SCORE:
0.6405
HELIX:
0.0134
FCONS_SCORE:
0.8145
RIG_SCORE:
0.6587
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K662N
TCGA-CC-A7IG
LIHC
TCGA
PVTTT
DEG_SPOP_SBC_1
0.3611
p.K662N
DO52179
LIHC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.3611
p.S676F
TCGA-GN-A269
SKCM
TCGA
PVTTT
DEG_SPOP_SBC_1
0.1389
p.S676F
DO229446
SKCA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1389
p.S676F
DO37483
SKCM
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1389
p.S675A
TCGA-HU-A4GH
STAD
TCGA
PVTTT
DEG_SPOP_SBC_1
0.1667
p.S675A
DO50339
ESAD
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1667
p.S675A
DO47743
STAD
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1667
p.Q661K
DO49976
CESC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.6667
p.I679M
DO7938
COAD
ICGC
PVTTT
DEG_SPOP_SBC_1
0.0556
p.Q659H
DO233906
GACA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1667
p.Q659H
DO51740
STAD
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1667
p.P665H
DO228948
LICA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7694
p.T669K
DO228985
LICA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7306
p.P665T
DO229019
LICA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7031
p.T667N
DO229036
LICA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7055
p.Q678P
DO231856
LINC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.0833
p.P662H
DO45143
LIRI
ICGC
PVTTT
DEG_SPOP_SBC_1
0.3611
p.P668T
DO26424
LUSC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7031
p.M676I
DO51276
SKCM
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1389
p.S656A
SIDM00656
Burkitt's Lymphoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.0833
p.S656A
SIDM00479
Esophageal Carcinoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.0833
p.S656A
SIDM00721
Small Cell Lung Carcinoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.0833
p.S656A
SIDM00641
Burkitt's Lymphoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.0833
p.P659H
SIDM01017
B-Lymphoblastic Leukemia
GDSC
PVTTT
DEG_SPOP_SBC_1
0.1667
p.P659H
ACH-002255
Lymphoma
CCLE
PVTTT
DEG_SPOP_SBC_1
0.1667
p.P659H
KARPAS-231
haematopoietic_and_lymphoid_tissue
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.1667
p.S656L
SIDM01017
B-Lymphoblastic Leukemia
GDSC
PVTTT
DEG_SPOP_SBC_1
0.0833
p.S656L
ACH-002255
Lymphoma
CCLE
PVTTT
DEG_SPOP_SBC_1
0.0833
p.S656L
KARPAS-231
haematopoietic_and_lymphoid_tissue
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.0833
p.V672L
SIDM00220
Ovarian Carcinoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.25
p.V672L
ACH-000962
Ovarian Cancer
CCLE
PVTTT
DEG_SPOP_SBC_1
0.25
p.V672L
ACH-001145
Ovarian Cancer
CCLE
PVTTT
DEG_SPOP_SBC_1
0.25
p.V672L
OC-314
ovary
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.25
p.T668A
ACH-002348
Non-Cancerous
CCLE
PVTTT
DEG_SPOP_SBC_1
0.7139
Drug responses associated with PCLO mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NKB5
Pecanex-like protein 2
DEG_SPOP_SBC_1
2000:2004
PVTTT
SPOP
0.9571
More...
O43283
Mitogen-activated protein kinase kinase kinase 13
DEG_SPOP_SBC_1
63:67
PVTTT
SPOP
0.9958
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2870:2874
PVTTT
SPOP
0.5381
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2876:2880
PVTTT
SPOP
0.9639
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2882:2886
PVTTT
SPOP
0.8697
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2889:2893
PVTTT
SPOP
0.991
More...
P18583
Protein SON
DEG_SPOP_SBC_1
507:511
PVTTT
SPOP
0.6512
More...
P27540
Aryl hydrocarbon receptor nuclear translocator
DEG_SPOP_SBC_1
530:534
PVTTT
SPOP
0.9876
More...
P36956
Sterol regulatory element-binding protein 1
DEG_SPOP_SBC_1
224:228
PVTTT
SPOP
0.9066
More...
P49848
Transcription initiation factor TFIID subunit 6
DEG_SPOP_SBC_1
570:574
PVTTT
SPOP
0.5016
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3488:3492
PVTTT
SPOP
0.525
More...
Q14896
Myosin-binding protein C, cardiac-type
DEG_SPOP_SBC_1
955:959
PVTTT
SPOP
0.8503
More...
Q8WZ42
Titin
DEG_SPOP_SBC_1
33135:33139
PVTTT
SPOP
0.9908
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
203:207
PVTTT
SPOP
0.9927
More...
Q9Y6V0
Protein piccolo
DEG_SPOP_SBC_1
665:669
PVTTT
SPOP
0.9936
More...
Q7Z2K8
G protein-regulated inducer of neurite outgrowth 1
DEG_SPOP_SBC_1
616:620
PVTTT
SPOP
0.9985
More...