DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PVTTT
Uniprot ID:
P36956
Source protein:
Sterol regulatory element-binding protein 1
Source gene:
SREBF1
Class:
DEG_SPOP_SBC_1
Location:
224:228
E3 ligase:
SPOP
DEGRON score:
0.9066
ASA_SCORE:
83.52
COIL:
0.7968
CONS_SCORE:
0.279
DSS_SCORE:
0.2693
HELIX:
0.0182
FCONS_SCORE:
0.8572
RIG_SCORE:
0.8013
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P224S
TCGA-CK-4951
COAD
TCGA
PVTTT
DEG_SPOP_SBC_1
0.6752
p.P223L
TCGA-CK-6747
COAD
TCGA
PVTTT
DEG_SPOP_SBC_1
0.3056
p.S230Y
TCGA-IQ-A61I
HNSC
TCGA
PVTTT
DEG_SPOP_SBC_1
0.2778
p.T238M
DO219731
CESC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.0556
p.T238M
DO230343
COCA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.0556
p.T238M
DO229259
THCA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.0556
p.R233C
DO233903
GACA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.1944
p.P220T
DO229029
LICA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.2222
p.Q232K
DO229036
LICA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.2222
p.T226K
DO229009
LICA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7306
p.T221M
DO23468
LINC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.25
p.S225I
DO228138
PBCA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7341
p.Q232H
DO232224
PBCA
ICGC
PVTTT
DEG_SPOP_SBC_1
0.2222
p.S231L
DO38195
STAD
ICGC
PVTTT
DEG_SPOP_SBC_1
0.25
p.T226M
DO40889
UCEC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.7423
p.T226M
647-V
urinary_tract
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.7423
p.T221A
DO41871
UCEC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.25
p.R220W
DO43891
UCEC
ICGC
PVTTT
DEG_SPOP_SBC_1
0.2222
p.V229I
SIDM01951
Colorectal Carcinoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.3056
p.V229I
SIDM00680
Colorectal Carcinoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.3056
p.V229I
LS-180
large_intestine
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.3056
p.P216H
SIDM00320
Non-Small Cell Lung Carcinoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.1111
p.S230A
SIDM00150
Colorectal Carcinoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.2778
p.S230A
KM12
large_intestine
COSMIC
PVTTT
DEG_SPOP_SBC_1
0.2778
p.L231V
SIDM01617
Endometrial Carcinoma
GDSC
PVTTT
DEG_SPOP_SBC_1
0.25
p.A219V
ACH-001416
Bladder Cancer
CCLE
PVTTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with SREBF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NKB5
Pecanex-like protein 2
DEG_SPOP_SBC_1
2000:2004
PVTTT
SPOP
0.9571
More...
O43283
Mitogen-activated protein kinase kinase kinase 13
DEG_SPOP_SBC_1
63:67
PVTTT
SPOP
0.9958
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2870:2874
PVTTT
SPOP
0.5381
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2876:2880
PVTTT
SPOP
0.9639
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2882:2886
PVTTT
SPOP
0.8697
More...
P12111
Collagen alpha-3
DEG_SPOP_SBC_1
2889:2893
PVTTT
SPOP
0.991
More...
P18583
Protein SON
DEG_SPOP_SBC_1
507:511
PVTTT
SPOP
0.6512
More...
P27540
Aryl hydrocarbon receptor nuclear translocator
DEG_SPOP_SBC_1
530:534
PVTTT
SPOP
0.9876
More...
P36956
Sterol regulatory element-binding protein 1
DEG_SPOP_SBC_1
224:228
PVTTT
SPOP
0.9066
More...
P49848
Transcription initiation factor TFIID subunit 6
DEG_SPOP_SBC_1
570:574
PVTTT
SPOP
0.5016
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3488:3492
PVTTT
SPOP
0.525
More...
Q14896
Myosin-binding protein C, cardiac-type
DEG_SPOP_SBC_1
955:959
PVTTT
SPOP
0.8503
More...
Q8WZ42
Titin
DEG_SPOP_SBC_1
33135:33139
PVTTT
SPOP
0.9908
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
203:207
PVTTT
SPOP
0.9927
More...
Q9Y6V0
Protein piccolo
DEG_SPOP_SBC_1
665:669
PVTTT
SPOP
0.9936
More...
Q7Z2K8
G protein-regulated inducer of neurite outgrowth 1
DEG_SPOP_SBC_1
616:620
PVTTT
SPOP
0.9985
More...