DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VPSTT
Uniprot ID:
O14974
Source protein:
Protein phosphatase 1 regulatory subunit 12A
Source gene:
PPP1R12A
Class:
DEG_SPOP_SBC_1
Location:
567:571
E3 ligase:
SPOP
DEGRON score:
0.9968
ASA_SCORE:
97.54
COIL:
0.9624
CONS_SCORE:
0.3623
DSS_SCORE:
0.5009
HELIX:
0.0142
FCONS_SCORE:
1.0853
RIG_SCORE:
0.6396
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P568S
TCGA-A5-A1OF
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.5641
p.P568S
DO42568
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.5641
p.L562V
TCGA-EY-A1GI
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.1944
p.L562V
DO41211
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1944
p.S565C
TCGA-FJ-A3Z7
BLCA
TCGA
VPSTT
DEG_SPOP_SBC_1
0.2778
p.S565C
DO463
BLCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2778
p.S565C
SIDM00845
Burkitt's Lymphoma
GDSC
VPSTT
DEG_SPOP_SBC_1
0.2778
p.S565C
SIDM00461
Acute Myeloid Leukemia
GDSC
VPSTT
DEG_SPOP_SBC_1
0.2778
p.S565C
SIDM00946
T-Lymphoblastic Leukemia
GDSC
VPSTT
DEG_SPOP_SBC_1
0.2778
p.S565C
SIDM01519
Head and Neck Carcinoma
GDSC
VPSTT
DEG_SPOP_SBC_1
0.2778
p.S565C
ACH-000786
Lymphoma
CCLE
VPSTT
DEG_SPOP_SBC_1
0.2778
p.S565C
ACH-000992
Head and Neck Cancer
CCLE
VPSTT
DEG_SPOP_SBC_1
0.2778
p.R557K
TCGA-XF-AAN2
BLCA
TCGA
VPSTT
DEG_SPOP_SBC_1
0.0556
p.R557K
DO219052
BLCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.A580D
DO229025
LICA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0833
p.T563A
MFE-319
endometrium
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.2222
p.L557S
SK-UT-1
soft_tissue
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.T563N
LNCaP-Clone-FGC
prostate
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.2222
p.V570A
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.6936
Drug responses associated with PPP1R12A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SPOP_SBC_1
567:571
VPSTT
SPOP
0.9968
More...
O15020
Spectrin beta chain, non-erythrocytic 2
DEG_SPOP_SBC_1
2342:2346
VPSTT
SPOP
0.9599
More...
O15265
Ataxin-7
DEG_SPOP_SBC_1
566:570
VPSTT
SPOP
0.7372
More...
P18583
Protein SON
DEG_SPOP_SBC_1
675:679
VPSTT
SPOP
0.8249
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
193:197
VPSTT
SPOP
0.9767
More...
Q13123
Protein Red
DEG_SPOP_SBC_1
326:330
VPSTT
SPOP
0.9958
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
533:537
VPSTT
SPOP
0.9759
More...
Q1W6H9
Protein FAM110C
DEG_SPOP_SBC_1
280:284
VPSTT
SPOP
0.9945
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
900:904
VPSTT
SPOP
0.9989
More...
Q9UH73
Transcription factor COE1
DEG_SPOP_SBC_1
471:475
VPSTT
SPOP
0.9983
More...
Q6ZU65
Ubinuclein-2
DEG_SPOP_SBC_1
1004:1008
VPSTT
SPOP
0.8553
More...