DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPSTT
Uniprot ID:
Q6ZU65
Source protein:
Ubinuclein-2
Source gene:
UBN2
Class:
DEG_SPOP_SBC_1
Location:
1004:1008
E3 ligase:
SPOP
DEGRON score:
0.8553
ASA_SCORE:
90.2
COIL:
0.9548
CONS_SCORE:
0.3099
DSS_SCORE:
0.4776
HELIX:
0.0162
FCONS_SCORE:
1.0179
RIG_SCORE:
0.6771
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1016N
TCGA-37-4130
LUSC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.2222
p.K1016N
DO26490
LUSC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2222
p.K1016M
TCGA-56-8082
LUSC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.2222
p.K1016M
DO223722
LUSC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2222
p.Q994E
TCGA-BK-A0C9
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.0556
p.Q994E
TCGA-K4-A6MB
BLCA
TCGA
VPSTT
DEG_SPOP_SBC_1
0.0556
p.Q994E
DO44077
BLCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.Q994E
DO41253
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.S1001T
TCGA-EB-A4IS
SKCM
TCGA
VPSTT
DEG_SPOP_SBC_1
0.25
p.S1001T
DO47281
SKCM
ICGC
VPSTT
DEG_SPOP_SBC_1
0.25
p.G995V
TCGA-EE-A3AD
SKCM
TCGA
VPSTT
DEG_SPOP_SBC_1
0.0833
p.G995V
DO37707
SKCM
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0833
p.M1018T
DO222737
COCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.G995W
ACH-001786
Colon/Colorectal Cancer
CCLE
VPSTT
DEG_SPOP_SBC_1
0.0833
Drug responses associated with UBN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SPOP_SBC_1
567:571
VPSTT
SPOP
0.9968
More...
O15020
Spectrin beta chain, non-erythrocytic 2
DEG_SPOP_SBC_1
2342:2346
VPSTT
SPOP
0.9599
More...
O15265
Ataxin-7
DEG_SPOP_SBC_1
566:570
VPSTT
SPOP
0.7372
More...
P18583
Protein SON
DEG_SPOP_SBC_1
675:679
VPSTT
SPOP
0.8249
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
193:197
VPSTT
SPOP
0.9767
More...
Q13123
Protein Red
DEG_SPOP_SBC_1
326:330
VPSTT
SPOP
0.9958
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
533:537
VPSTT
SPOP
0.9759
More...
Q1W6H9
Protein FAM110C
DEG_SPOP_SBC_1
280:284
VPSTT
SPOP
0.9945
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
900:904
VPSTT
SPOP
0.9989
More...
Q9UH73
Transcription factor COE1
DEG_SPOP_SBC_1
471:475
VPSTT
SPOP
0.9983
More...
Q6ZU65
Ubinuclein-2
DEG_SPOP_SBC_1
1004:1008
VPSTT
SPOP
0.8553
More...