DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VPSTT
Uniprot ID:
Q9UH73
Source protein:
Transcription factor COE1
Source gene:
EBF1
Class:
DEG_SPOP_SBC_1
Location:
471:475
E3 ligase:
SPOP
DEGRON score:
0.9983
ASA_SCORE:
75.9
COIL:
0.9298
CONS_SCORE:
0.4303
DSS_SCORE:
0.5897
HELIX:
0.0166
FCONS_SCORE:
1.1221
RIG_SCORE:
0.6542
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V471L
TCGA-39-5011
LUSC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.6765
p.V471L
DO27532
LUSC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.6765
p.P472S
TCGA-CV-7568
HNSC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.5641
p.P472S
DO14160
HNSC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.5641
p.G469R
TCGA-DI-A1BU
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.2778
p.G469R
DO42023
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2778
p.P472L
TCGA-DK-AA6U
BLCA
TCGA
VPSTT
DEG_SPOP_SBC_1
0.6471
p.P472L
DO219008
BLCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.6471
p.P476S
TCGA-DK-AA77
BLCA
TCGA
VPSTT
DEG_SPOP_SBC_1
0.3056
p.P476S
DO219014
BLCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.3056
p.V465I
TCGA-EO-A22U
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.1667
p.V465I
DO43755
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1667
p.S466L
TCGA-EW-A1J5
BRCA
TCGA
VPSTT
DEG_SPOP_SBC_1
0.1944
p.S466L
DO6144
BRCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1944
p.G469W
TCGA-FS-A1ZP
SKCM
TCGA
VPSTT
DEG_SPOP_SBC_1
0.2778
p.G469W
DO37703
SKCM
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2778
p.V471M
TCGA-R5-A7ZI
STAD
TCGA
VPSTT
DEG_SPOP_SBC_1
0.7208
p.V471M
DO222342
STAD
ICGC
VPSTT
DEG_SPOP_SBC_1
0.7208
p.N465T
DO5857
BRCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1667
p.F473L
DO7783
COAD
ICGC
VPSTT
DEG_SPOP_SBC_1
0.6981
p.V484I
DO227549
COCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0833
p.V484I
DO34544
PACA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0833
p.V484I
SIDM00683
Prostate Carcinoma
GDSC
VPSTT
DEG_SPOP_SBC_1
0.0833
p.V484I
SIDM00882
Breast Carcinoma
GDSC
VPSTT
DEG_SPOP_SBC_1
0.0833
p.V484I
HCC1419
breast
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.0833
p.V484M
DO234185
ESAD
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0833
p.A478V
DO218769
GACA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.25
p.A483D
DO228971
LICA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1111
p.P467Q
DO229029
LICA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2222
p.G469E
DO229050
LICA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2778
p.S468N
DO52291
LIHC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.25
p.S470L
DO222875
MELA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.3056
p.S463N
DO46329
OV
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1111
p.L462I
DO38192
STAD
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0833
p.L462I
DO219784
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0833
p.C466F
DO229229
THCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1944
p.V471A
ACH-000997
Colon/Colorectal Cancer
CCLE
VPSTT
DEG_SPOP_SBC_1
0.5825
p.V471A
ACH-001061
Colon/Colorectal Cancer
CCLE
VPSTT
DEG_SPOP_SBC_1
0.5825
p.V471A
HCT-15
large_intestine
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.5825
p.G461S
Mewo
skin
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.G461D
Mewo
skin
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.P472T
22RV1
prostate
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.5919
Drug responses associated with EBF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SPOP_SBC_1
567:571
VPSTT
SPOP
0.9968
More...
O15020
Spectrin beta chain, non-erythrocytic 2
DEG_SPOP_SBC_1
2342:2346
VPSTT
SPOP
0.9599
More...
O15265
Ataxin-7
DEG_SPOP_SBC_1
566:570
VPSTT
SPOP
0.7372
More...
P18583
Protein SON
DEG_SPOP_SBC_1
675:679
VPSTT
SPOP
0.8249
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
193:197
VPSTT
SPOP
0.9767
More...
Q13123
Protein Red
DEG_SPOP_SBC_1
326:330
VPSTT
SPOP
0.9958
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
533:537
VPSTT
SPOP
0.9759
More...
Q1W6H9
Protein FAM110C
DEG_SPOP_SBC_1
280:284
VPSTT
SPOP
0.9945
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
900:904
VPSTT
SPOP
0.9989
More...
Q9UH73
Transcription factor COE1
DEG_SPOP_SBC_1
471:475
VPSTT
SPOP
0.9983
More...
Q6ZU65
Ubinuclein-2
DEG_SPOP_SBC_1
1004:1008
VPSTT
SPOP
0.8553
More...