DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VPSTT
Uniprot ID:
O15020
Source protein:
Spectrin beta chain, non-erythrocytic 2
Source gene:
SPTBN2
Class:
DEG_SPOP_SBC_1
Location:
2342:2346
E3 ligase:
SPOP
DEGRON score:
0.9599
ASA_SCORE:
84.66
COIL:
0.941
CONS_SCORE:
0.2791
DSS_SCORE:
0.6784
HELIX:
0.0182
FCONS_SCORE:
0.965
RIG_SCORE:
0.6898
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E2336K
TCGA-FI-A2F8
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.1667
p.E2336K
DO42448
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1667
p.R2347W
DO222840
COCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.3056
p.P2337T
DO229022
LICA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1944
p.L2342F
DO229459
SKCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.6981
p.S2334P
DO223908
SKCM
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1111
p.P2338T
DO43626
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2222
p.R2356Q
DO52412
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.L2346I
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.7174
p.P2341L
NB12
autonomic_ganglia
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.3056
p.P2341S
NCI-H2066
lung
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.3056
Drug responses associated with SPTBN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SPOP_SBC_1
567:571
VPSTT
SPOP
0.9968
More...
O15020
Spectrin beta chain, non-erythrocytic 2
DEG_SPOP_SBC_1
2342:2346
VPSTT
SPOP
0.9599
More...
O15265
Ataxin-7
DEG_SPOP_SBC_1
566:570
VPSTT
SPOP
0.7372
More...
P18583
Protein SON
DEG_SPOP_SBC_1
675:679
VPSTT
SPOP
0.8249
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
193:197
VPSTT
SPOP
0.9767
More...
Q13123
Protein Red
DEG_SPOP_SBC_1
326:330
VPSTT
SPOP
0.9958
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
533:537
VPSTT
SPOP
0.9759
More...
Q1W6H9
Protein FAM110C
DEG_SPOP_SBC_1
280:284
VPSTT
SPOP
0.9945
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
900:904
VPSTT
SPOP
0.9989
More...
Q9UH73
Transcription factor COE1
DEG_SPOP_SBC_1
471:475
VPSTT
SPOP
0.9983
More...
Q6ZU65
Ubinuclein-2
DEG_SPOP_SBC_1
1004:1008
VPSTT
SPOP
0.8553
More...