DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VPSTT
Uniprot ID:
P18583
Source protein:
Protein SON
Source gene:
SON
Class:
DEG_SPOP_SBC_1
Location:
675:679
E3 ligase:
SPOP
DEGRON score:
0.8249
ASA_SCORE:
83.06
COIL:
0.8944
CONS_SCORE:
0.7852
DSS_SCORE:
0.3448
HELIX:
0.0296
FCONS_SCORE:
1.013
RIG_SCORE:
0.7663
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L673M
TCGA-05-4396
LUAD
TCGA
VPSTT
DEG_SPOP_SBC_1
0.2778
p.L673M
DO23838
LUAD
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2778
p.P676S
TCGA-AA-3672
COAD
TCGA
VPSTT
DEG_SPOP_SBC_1
0.5641
p.P676S
DO9010
COAD
ICGC
VPSTT
DEG_SPOP_SBC_1
0.5641
p.S670L
TCGA-AP-A0LM
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.1944
p.S670L
DO43306
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1944
p.S670L
SIDM00958
Chronic Myelogenous Leukemia
GDSC
VPSTT
DEG_SPOP_SBC_1
0.1944
p.S670L
ACH-000920
Leukemia
CCLE
VPSTT
DEG_SPOP_SBC_1
0.1944
p.S677L
TCGA-HT-8564
LGG
TCGA
VPSTT
DEG_SPOP_SBC_1
0.7667
p.S677L
DO44623
LGG
ICGC
VPSTT
DEG_SPOP_SBC_1
0.7667
p.N685S
DO233734
GACA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1667
p.S665A
DO49533
LAML
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.S665A
DO231260
LAML
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.Q671H
DO229029
LICA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2222
p.T678M
SIDM00611
Kidney Carcinoma
GDSC
VPSTT
DEG_SPOP_SBC_1
0.7423
p.T678M
ACH-000684
Kidney Cancer
CCLE
VPSTT
DEG_SPOP_SBC_1
0.7423
p.T678M
KMRC-1
kidney
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.7423
p.V675A
SIDM01248
Thyroid Gland Carcinoma
GDSC
VPSTT
DEG_SPOP_SBC_1
0.5825
p.V675A
SIDM01167
Thyroid Gland Carcinoma
GDSC
VPSTT
DEG_SPOP_SBC_1
0.5825
p.V675A
ACH-000163
Thyroid Cancer
CCLE
VPSTT
DEG_SPOP_SBC_1
0.5825
p.V675A
ACH-001023
Thyroid Cancer
CCLE
VPSTT
DEG_SPOP_SBC_1
0.5825
p.V675A
CGTH-W-1
thyroid
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.5825
p.M667I
SIDM00188
Kidney Carcinoma
GDSC
VPSTT
DEG_SPOP_SBC_1
0.1111
p.M667I
ACH-002139
Kidney Cancer
CCLE
VPSTT
DEG_SPOP_SBC_1
0.1111
p.M667I
HA7-RCC
kidney
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.1111
Drug responses associated with SON mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SPOP_SBC_1
567:571
VPSTT
SPOP
0.9968
More...
O15020
Spectrin beta chain, non-erythrocytic 2
DEG_SPOP_SBC_1
2342:2346
VPSTT
SPOP
0.9599
More...
O15265
Ataxin-7
DEG_SPOP_SBC_1
566:570
VPSTT
SPOP
0.7372
More...
P18583
Protein SON
DEG_SPOP_SBC_1
675:679
VPSTT
SPOP
0.8249
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
193:197
VPSTT
SPOP
0.9767
More...
Q13123
Protein Red
DEG_SPOP_SBC_1
326:330
VPSTT
SPOP
0.9958
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
533:537
VPSTT
SPOP
0.9759
More...
Q1W6H9
Protein FAM110C
DEG_SPOP_SBC_1
280:284
VPSTT
SPOP
0.9945
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
900:904
VPSTT
SPOP
0.9989
More...
Q9UH73
Transcription factor COE1
DEG_SPOP_SBC_1
471:475
VPSTT
SPOP
0.9983
More...
Q6ZU65
Ubinuclein-2
DEG_SPOP_SBC_1
1004:1008
VPSTT
SPOP
0.8553
More...