DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VPSTT
Uniprot ID:
Q14686
Source protein:
Nuclear receptor coactivator 6
Source gene:
NCOA6
Class:
DEG_SPOP_SBC_1
Location:
533:537
E3 ligase:
SPOP
DEGRON score:
0.9759
ASA_SCORE:
94.18
COIL:
0.9646
CONS_SCORE:
0.6835
DSS_SCORE:
0.7213
HELIX:
0.0148
FCONS_SCORE:
1.0783
RIG_SCORE:
0.6594
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S535L
TCGA-A5-A0GP
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.7667
p.S535L
TCGA-DG-A2KL
CESC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.7667
p.S535L
TCGA-FW-A3R5
SKCM
TCGA
VPSTT
DEG_SPOP_SBC_1
0.7667
p.S535L
DO51596
CESC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.7667
p.S535L
DO37406
SKCM
ICGC
VPSTT
DEG_SPOP_SBC_1
0.7667
p.S535L
DO41109
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.7667
p.V533M
TCGA-B5-A1MX
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.7208
p.V533M
DO41999
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.7208
p.G531S
DO229325
BTCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.2778
p.A546D
DO229034
LICA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0833
Drug responses associated with NCOA6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SPOP_SBC_1
567:571
VPSTT
SPOP
0.9968
More...
O15020
Spectrin beta chain, non-erythrocytic 2
DEG_SPOP_SBC_1
2342:2346
VPSTT
SPOP
0.9599
More...
O15265
Ataxin-7
DEG_SPOP_SBC_1
566:570
VPSTT
SPOP
0.7372
More...
P18583
Protein SON
DEG_SPOP_SBC_1
675:679
VPSTT
SPOP
0.8249
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
193:197
VPSTT
SPOP
0.9767
More...
Q13123
Protein Red
DEG_SPOP_SBC_1
326:330
VPSTT
SPOP
0.9958
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
533:537
VPSTT
SPOP
0.9759
More...
Q1W6H9
Protein FAM110C
DEG_SPOP_SBC_1
280:284
VPSTT
SPOP
0.9945
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
900:904
VPSTT
SPOP
0.9989
More...
Q9UH73
Transcription factor COE1
DEG_SPOP_SBC_1
471:475
VPSTT
SPOP
0.9983
More...
Q6ZU65
Ubinuclein-2
DEG_SPOP_SBC_1
1004:1008
VPSTT
SPOP
0.8553
More...