DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VPSTT
Uniprot ID:
Q1W6H9
Source protein:
Protein FAM110C
Source gene:
FAM110C
Class:
DEG_SPOP_SBC_1
Location:
280:284
E3 ligase:
SPOP
DEGRON score:
0.9945
ASA_SCORE:
61.32
COIL:
0.8916
CONS_SCORE:
0.5787
DSS_SCORE:
0.4668
HELIX:
0.0368
FCONS_SCORE:
0.7458
RIG_SCORE:
0.7837
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I277M
TCGA-AA-3984
COAD
TCGA
VPSTT
DEG_SPOP_SBC_1
0.25
p.I277M
DO9002
COAD
ICGC
VPSTT
DEG_SPOP_SBC_1
0.25
p.S282I
TCGA-AP-A0LM
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.7341
p.S282I
DO43306
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.7341
p.R292H
TCGA-AZ-4315
COAD
TCGA
VPSTT
DEG_SPOP_SBC_1
0.1111
p.R292H
DO8842
COAD
ICGC
VPSTT
DEG_SPOP_SBC_1
0.1111
p.S285L
TCGA-DK-AA75
BLCA
TCGA
VPSTT
DEG_SPOP_SBC_1
0.3056
p.S285L
DO48364
BLCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.3056
p.S285L
DO219012
BLCA
ICGC
VPSTT
DEG_SPOP_SBC_1
0.3056
p.Q279K
TCGA-EY-A1GX
UCEC
TCGA
VPSTT
DEG_SPOP_SBC_1
0.3056
p.Q279K
DO41967
UCEC
ICGC
VPSTT
DEG_SPOP_SBC_1
0.3056
p.G270R
TCGA-FR-A726
SKCM
TCGA
VPSTT
DEG_SPOP_SBC_1
0.0556
p.G270R
DO48665
SKCM
ICGC
VPSTT
DEG_SPOP_SBC_1
0.0556
p.P281T
SIDM01073
Other Blood Cancers
GDSC
VPSTT
DEG_SPOP_SBC_1
0.5919
p.P281T
ACH-002242
Leukemia
CCLE
VPSTT
DEG_SPOP_SBC_1
0.5919
p.P281T
HC-1
haematopoietic_and_lymphoid_tissue
COSMIC
VPSTT
DEG_SPOP_SBC_1
0.5919
Drug responses associated with FAM110C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_SPOP_SBC_1
567:571
VPSTT
SPOP
0.9968
More...
O15020
Spectrin beta chain, non-erythrocytic 2
DEG_SPOP_SBC_1
2342:2346
VPSTT
SPOP
0.9599
More...
O15265
Ataxin-7
DEG_SPOP_SBC_1
566:570
VPSTT
SPOP
0.7372
More...
P18583
Protein SON
DEG_SPOP_SBC_1
675:679
VPSTT
SPOP
0.8249
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
193:197
VPSTT
SPOP
0.9767
More...
Q13123
Protein Red
DEG_SPOP_SBC_1
326:330
VPSTT
SPOP
0.9958
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
533:537
VPSTT
SPOP
0.9759
More...
Q1W6H9
Protein FAM110C
DEG_SPOP_SBC_1
280:284
VPSTT
SPOP
0.9945
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
900:904
VPSTT
SPOP
0.9989
More...
Q9UH73
Transcription factor COE1
DEG_SPOP_SBC_1
471:475
VPSTT
SPOP
0.9983
More...
Q6ZU65
Ubinuclein-2
DEG_SPOP_SBC_1
1004:1008
VPSTT
SPOP
0.8553
More...