Logo
Home Search BLAST Integration Document Link Support Citation

Dataset Description
  • Dataset Name: 11093800
  • Species: Human
  • Method: Microarray
  • No. of Genes: 40
  • Tissue: SH-SY5Y neuroblastoma cells
  • Phenotype: Ethanol response
  • Publication: Thibault et al. Mol Pharmacol. (2000) Expression profiling of neural cells reveals specific patterns of ethanol-responsive gene expression. PubMed
  • Dataset Summary: We used oligonucleotide arrays to study nearly 6000 genes in human SH-SY5Y neuroblastoma cells exposed to chronic ethanol. A set of 42 genes had consistently increased or decreased mRNA abundance after 3 days of ethanol treatment.

    Gene list of this dataset (40 genes)
    GeneIDSymbolNameGenetic locationOriginal ID1Original ID2
    397ARHGDIBRho GDP dissociation inhibitor (GDI) beta12p12.3ARHGDIBL20688
    1139CHRNA7cholinergic receptor, nicotinic, alpha 715q14CHRNA7X70297
    1363CPEcarboxypeptidase E4q32.3CPEX51405
    1621DBHdopamine beta-hydroxylase (dopamine beta-monooxygenase)9q34DBHX13255
    8788DLK1delta-like 1 homolog (Drosophila)14q32DLK1T49117
    1846DUSP4dual specificity phosphatase 48p12-p11DUSP4U21108
    51465UBE2J1ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)6q15UBE2J1R01227
    1956EGFRepidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)7p12EGFRH02836
    2290FOXG1forkhead box G114q13FKHL1R60332
    2643GCH1GTP cyclohydrolase 1 (dopa-responsive dystonia)14q22.1-q22.2GCH1U19523
    2745GLRXglutaredoxin (thioltransferase)5q14GLRXX76648
    2948GSTM4glutathione S-transferase M41p13.3GSTM4M99422
    4774NFIAnuclear factor I/A1p31.3-p31.2NFIAH08637
        HIRHH14506
        HRT18T53412
    3574IL7interleukin 78q12-q13IL7J04156
    4060LUMlumican12q21.3-q22LUMU21128
    6347CCL2chemokine (C-C motif) ligand 217q11.2-q12MCP1M26683
    4256MGPmatrix Gla protein12p13.1-p12.3MGPH52207
    4671NAIPNLR family, apoptosis inhibitory protein5q13.1NAIPU192521
    4741NEFMneurofilament, medium polypeptide 150kDa8p21NEF3Y00067
    4781NFIBnuclear factor I/B9p24.1NFIBH91713
    4860NPnucleoside phosphorylase14q13.1NPT47964
    4885NPTX2neuronal pentraxin II7q21.3-q22.1NPTX2U29195
    8439NSMAFneutral sphingomyelinase (N-SMase) activation associated factor8q12-q13NSMAFR41765
    5243ABCB1ATP-binding cassette, sub-family B (MDR/TAP), member 17q21.1PGY1M29447
    5283PIGHphosphatidylinositol glycan anchor biosynthesis, class H14q11-q24PIGHL19783
    5394EXOSC10exosome component 101p36.22PMSCL2R40490
    3087HHEXhematopoietically expressed homeobox10q23.33PRHXX67235
    100131262LOC100131262--LOC100131262R47985
    6158RPL28ribosomal protein L2819q13.4RPL28R60751
    730241LOC730241-14q32.31LOC730241R73461
    5880RAC2ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)22q13.1RAC2H42477
    9045RPL14ribosomal protein L143p22-p21.2RPL14R82938
    6530SLC6A2solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 216q12.2SLC6A2M65105
    6662SOX9SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal)17q24.3-q25.1SOX9Z46629
    6678SPARCsecreted protein, acidic, cysteine-rich (osteonectin)5q31.3-q32SPARCT54767
    10006ABI1abl-interactor 110p11.2SSH3BP1R34245
    7112TMPOthymopoietin12q22TMPOU09086
    7157TP53tumor protein p5317p13.1TP53X54156
    7593MZF1myeloid zinc finger 119q13.2-q13.4ZNF42R83364