Search results: The pahtway p3233 has 60 genes in the original annotation. Currently, there are 46 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
9118INANEF5 | NF-66 | TXBP-1internexin neuronal intermediate filament protein alpha10q24.33CV:PGCnp
GO_Annotation
LK:YES
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
3992FADS1D5D | FADS6 | FADSD5 | LLCDL1 | TU12fatty acid desaturase 111q12.2-q13.1DEG:Sanders_2013
PMID:cooccur
377ARF3-ADP ribosylation factor 312q13DEG:Maycox_2009
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3626INHBCIHBCinhibin beta C12q13.1CV:PGCnp
1431CS-citrate synthase12q13.2CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1282COL4A1BSVD | RATORcollagen type IV alpha 113q34CV:GWASdb
CV:PGCnp
27229TUBGCP476P | GCP-4 | GCP4 | Grip76 | MCCRP3tubulin gamma complex associated protein 415q15CV:PGCnp
83660TLN2ILWEQtalin 215q22.2CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
10099TSPAN3TM4-A | TM4SF8 | TSPAN-3tetraspanin 315q24.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
654780SFPQ-splicing factor proline/glutamine-rich16q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
6426SRSF1ASF | SF2 | SF2p33 | SFRS1 | SRp30aserine/arginine-rich splicing factor 117q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7716VEZF1DB1 | ZNF161vascular endothelial zinc finger 117q22CV:PGCnp
DMG:Jaffe_2016
5608MAP2K6MAPKK6 | MEK6 | MKK6 | PRKMK6 | SAPKK-3 | SAPKK3mitogen-activated protein kinase kinase 617q24.3CV:PGCnp
8570KHSRPFBP2 | FUBP2 | KSRPKH-type splicing regulatory protein19p13.3CV:PGCnp
DMG:Wockner_2014
5178PEG3PW1 | ZKSCAN22 | ZNF904 | ZSCAN24paternally expressed 319q13.4CV:PGCnpCompositeSet
Darnell FMRP targets
10155TRIM28KAP1 | PPP1R157 | RNF96 | TF1B | TIF1Btripartite motif containing 2819q13.4CV:PGCnpAscano FMRP targets
4808NHLH2HEN2 | NSCL2 | bHLHa34nescient helix-loop-helix 21p12-p11CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
6421SFPQPOMP100 | PPP1R140 | PSFsplicing factor proline/glutamine-rich1p34.3CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
8565YARSCMTDIC | TYRRS | YRS | YTStyrosyl-tRNA synthetase1p35.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
9869SETDB1ESET | H3-K9-HMTase4 | KG1T | KMT1E | TDRD21SET domain bifurcated 11q21CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
2058EPRSEARS | GLUPRORS | PARS | PIG32 | QARS | QPRSglutamyl-prolyl-tRNA synthetase1q41GO_Annotation
Network
PMID:cooccur
CompositeSet
Ascano FMRP targets
7678ZNF124HZF-16 | HZF16 | ZK7zinc finger protein 1241q44CV:GWAScat
CV:PGCnp
754PTTG1IPC21orf1 | C21orf3 | PBFpituitary tumor-transforming 1 interacting protein21q22.3DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
10128LRPPRCCLONE-23970 | GP130 | LRP130 | LSFCleucine rich pentatricopeptide repeat containing2p21CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
790CADCDG1Zcarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase2p22-p21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
7852CXCR4CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMSC-X-C motif chemokine receptor 42q21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
10716TBR1TBR-1 | TES-56T-box, brain 12q24CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
491ATP2B2PMCA2 | PMCA2a | PMCA2iATPase plasma membrane Ca2+ transporting 23p25.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
26043UBXN7UBXD7UBX domain protein 73q29CNV:YES
CV:PGCnp
DMG:Jaffe_2016
4552MTRRMSR | cblE5-methyltetrahydrofolate-homocysteine methyltransferase reductase5p15.31CV:PGCnp
PMID:cooccur
10016PDCD6ALG-2 | ALG2 | PEF1Bprogrammed cell death 65p15.33CV:PGCnp
DMG:Wockner_2014
Network
1462VCANCSPG2 | ERVR | GHAP | PG-M | WGN | WGN1versican5q14.3CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
5813PURAMRD31 | PUR-ALPHA | PUR1 | PURALPHApurine-rich element binding protein A5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3187HNRNPH1HNRPH | HNRPH1 | hnRNPHheterogeneous nuclear ribonucleoprotein H1 (H)5q35.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
203068TUBBCDCBM6 | CSCSC1 | M40 | OK/SW-cl.56 | TUBB1 | TUBB5tubulin beta class I6p21.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
Network
STRUCTURAL PLASTICITY
51465UBE2J1CGI-76 | HSPC153 | HSPC205 | HSU93243 | NCUBE-1 | NCUBE1 | UBC6 | UBC6E | Ubc6pubiquitin conjugating enzyme E2 J16q15CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10924SMPDL3AASM3A | ASML3a | yR36GH4.1sphingomyelin phosphodiesterase acid like 3A6q22.31CV:PGCnp
DMG:Nishioka_2013
11014KDELR2ELP-1 | ERD2.2KDEL endoplasmic reticulum protein retention receptor 27p22.1CV:PGCnp
DMG:Jaffe_2016
56829ZC3HAV1ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2zinc finger CCCH-type containing, antiviral 17q34CV:PGCnp
6917TCEA1GTF2S | SII | TCEA | TF2S | TFIIStranscription elongation factor A18q11.2CV:PGCnp
DMG:Jaffe_2016
9128PRPF4HPRP4 | HPRP4P | PRP4 | Prp4p | RP70 | SNRNP60pre-mRNA processing factor 49q31-q33CV:PGCnp
Network
Ascano FMRP targets
1955MEGF9EGFL5multiple EGF like domains 99q32-q33.3CV:PGCnp
DMG:Jaffe_2016
23133PHF8JHDM1F | MRXSSD | ZNF422PHD finger protein 8Xp11.22CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
8473OGTHINCUT-1 | HRNT1 | O-GLCNACO-linked N-acetylglucosamine (GlcNAc) transferaseXq13Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
Potential synaptic genes
546ATRXATR2 | JMS | MRX52 | MRXHF1 | RAD54 | RAD54L | SFM1 | SHS | XH2 | XNP | ZNF-HXalpha thalassemia/mental retardation syndrome X-linkedXq21.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
5973RENBPRBP | RNBPrenin binding proteinXq28CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur