Search results: The pahtway p3369 has 82 genes in the original annotation. Currently, there are 55 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
93377OPALINHTMP10 | TMEM10 | TMP10oligodendrocytic myelin paranodal and inner loop protein10q23-q24CV:PGCnp
57715SEMA4G-semaphorin 4G10q24.31CV:PGCnp
GO_Annotation
6934TCF7L2TCF-4 | TCF4transcription factor 7 like 210q25.3CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
2674GFRA1GDNFR | GDNFRA | GFR-ALPHA-1 | RET1L | RETL1 | TRNR1GDNF family receptor alpha 110q26.11CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
57084SLC17A6DNPI | VGLUT2solute carrier family 17 member 611p14.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
23052ENDOD1-endonuclease domain containing 111q21CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
8898MTMR2CMT4B | CMT4B1myotubularin related protein 211q22CV:PGCnp
586BCAT1BCATC | BCT1 | ECA39 | MECA39 | PNAS121 | PP18branched chain amino acid transaminase 112p12.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
1389CREBL2-cAMP responsive element binding protein like 212p13CV:PGCnp
DMG:Wockner_2014
57626KLHL1MRP2kelch like family member 113q21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
2262GPC5-glypican 513q32CV:GWASdb
CV:PGCnp
PMID:cooccur
6547SLC8A3NCX3solute carrier family 8 member A314q24.1CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
8788DLK1DLK | DLK-1 | Delta1 | FA1 | PREF1 | Pref-1 | ZOG | pG2delta-like 1 homolog (Drosophila)14q32CV:PGCnp
PMID:cooccur
463ZFHX3ATBF1 | ATBT | ZNF927zinc finger homeobox 316q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
57687VAT1L-vesicle amine transport 1-like16q23.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
230ALDOCALDCaldolase, fructose-bisphosphate C17cen-q12PMID:cooccurG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9001HAP1HAP2 | HIP5 | HLP | hHLP1huntingtin-associated protein 117q21.2-q21.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
57685CACHD1-cache domain containing 11p31.3CV:GWASdb
CV:PGCnp
GSMA_IIA
Ascano FMRP targets
22996TTC39AC1orf34 | DEME-6tetratricopeptide repeat domain 39A1p32.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8515ITGA10PRO827integrin subunit alpha 101q21CNV:YES
GSMA_I
GSMA_IIA
26052DNM3Dyna IIIdynamin 31q24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
183AGTANHU | SERPINA8angiotensinogen1q42.2CV:PGCnp
GO_Annotation
PMID:cooccur
51604PIGTCGI-06 | MCAHS3 | NDAP | PNH2phosphatidylinositol glycan anchor biosynthesis class T20q13.12CV:PGCnp
DMG:Jaffe_2016
56666PANX2PX2 | hPANX2pannexin 222q13.33CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
2019EN1-engrailed homeobox 12q14.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
2825GPR1-G protein-coupled receptor 12q33.3CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
3699ITIH3H3P | ITI-HC3 | SHAPinter-alpha-trypsin inhibitor heavy chain 33p21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
LK:YES
PMID:cooccur
10293TRAIPRNF206 | SCKL9 | TRIPTRAF interacting protein3p21.31CV:PGCnp
26577PCOLCE2PCPE2procollagen C-endopeptidase enhancer 23q21-q24CV:GWASdb
CV:PGCnp
2047EPHB1ELK | EPHT2 | Hek6 | NETEPH receptor B13q22.2CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
56648EIF5A2EIF-5A2 | eIF5AIIeukaryotic translation initiation factor 5A23q26.2CV:PGCnp
DMG:Wockner_2014
5860QDPRDHPR | PKU2 | SDR33C1quinoid dihydropteridine reductase4p15.31CV:GWASdb
CV:PGCnp
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
60312AFAP1AFAP | AFAP-110 | AFAP110actin filament associated protein 14p16CV:PGCnp
DMG:Wockner_2014
1047CLGN-calmegin4q28.3-q31.1DMG:Jaffe_2016
8001GLRA3-glycine receptor alpha 34q34.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
6531SLC6A3DAT | DAT1 | PKDYSsolute carrier family 6 member 35p15.3ADT:Sun_2012
Association
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
DOPAMINE
NEUROTRANSMITTER METABOLISM
79722ANKRD55-ankyrin repeat domain 555q11.2CV:PGCnp
PMID:cooccur
2741GLRA1HKPX1 | STHEglycine receptor alpha 15q32CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
134510UBLCP1CPUB1ubiquitin like domain containing CTD phosphatase 15q33.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
3159HMGA1HMG-R | HMGA1A | HMGIYhigh mobility group AT-hook 16p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
9308CD83BL11 | HB15CD83 molecule6p23CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
1644DDCAADCdopa decarboxylase7p12.2CV:PGCnp
PMID:cooccur
DOPAMINE
SEROTONIN
6522SLC4A2AE2 | BND3L | EPB3L1 | HKB3 | NBND3solute carrier family 4 member 27q36.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
54793KCTD9BTBD27potassium channel tetramerization domain containing 98p21.1DMG:vanEijk_2014
GSMA_I
GSMA_IIA
GSMA_IIE
23516SLC39A14LZT-Hs4 | NET34 | ZIP14 | cig19solute carrier family 39 member 148p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
8439NSMAFFAN | GRAMD5neutral sphingomyelinase activation associated factor8q12.1CV:PGCnp
DMG:Jaffe_2016
79776ZFHX4ZFH4 | ZHF4zinc finger homeobox 48q21.11CV:PGCnp
54796BNC2BSN2basonuclin 29p22.2CV:PGCnp
1306COL15A1-collagen type XV alpha 19q21-q22CV:PGCnp
DNM:Fromer_2014
CompositeSet
5730PTGDSL-PGDS | LPGDS | PDS | PGD2 | PGDS | PGDS2prostaglandin D2 synthase9q34.2-q34.3PMID:cooccur
92714ARRDC1-arrestin domain containing 19q34.3DNM:Fromer_2014CompositeSet
2742GLRA2GLRglycine receptor alpha 2Xp22.2CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
5354PLP1GPM6C | HLD1 | MMPL | PLP | PLP/DM20 | PMD | SPG2proteolipid protein 1Xq22Association
CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
3358HTR2C5-HT1C | 5-HT2C | 5-HTR2C | 5HTR2C | HTR1C5-hydroxytryptamine receptor 2CXq24ADT:Sun_2012
Association
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
55879GABRQTHETAgamma-aminobutyric acid type A receptor theta subunitXq28CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes