Gene set: GSMA_I

     Gene set description
  • Gene set name: GSMA_I
  • Method: genome scan meta-analysis
  • Number of genes: 2155
  • Reference: Lewis et al. (2003) Genome Scan Meta-Analysis of Schizophrenia and Bipolar Disorder, Part II: Schizophrenia. The American Journal of Human Genetics 73(1): 34 - 48 PubMed
  • Gene set summary: The GSMA_I gene set includes 2158 genes from 12 bins having both PAvgRnk and Pord <0.05 in Lewis et al. (2003) genome scan meta-analysis.
     Gene List

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Gene ID Symbol Official Full Name Start Site End Site Location
27440CECR5cat eye syndrome chromosome region, candidate 51599841016026177-
27439CECR6cat eye syndrome chromosome region, candidate 61597719015982143-
89781HPS4Hermansky-Pudlak syndrome 4251774462520982022cen-q12.3
29796UCRCubiquinol-cytochrome c reductase complex (7.2 kD)284933582849640222cen-q12.3
55954ZMAT5zinc finger, matrin type 5284569452849296922cen-q12.3
529ATP6V1E1ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1164549021649158822pter-q11.2|22q11.1
51537MTP18mitochondrial protein 18 kDa291517202915504122q
85359DGCR6LDiGeorge syndrome critical region gene 6-like186817991868760822q11
56241SUSD2sushi domain containing 2229074442291507422q11-q12
23786BCL2L13BCL2-like 13 (apoptosis facilitator)165014851659199122q11.1
637BIDBH3 interacting domain death agonist165969061663725822q11.1
150160CCT8L2chaperonin containing TCP1, subunit 8 (theta)-like 2154516481545370022q11.1
128954GAB4GRB2-associated binding protein family, member 4158228261586911222q11.1
23765IL17RAinterleukin 17 receptor A159458491597140522q11.1
51807TUBA8tubulin, alpha 8169735591699449822q11.1
150165XKR3XK, Kell blood group complex subunit-related family, member 3156443021568258422q11.1
83606C22orf13chromosome 22 open reading frame 13232664062328127522q11.2
51816CECR1cat eye syndrome chromosome region, candidate 1160401921607077922q11.2
27443CECR2cat eye syndrome chromosome region, candidate 2163366301641384522q11.2
54487DGCR8DiGeorge syndrome critical region gene 8184478341847940022q11.2
56478EIF4ENIF1eukaryotic translation initiation factor 4E nuclear import factor 1301653553021570422q11.2
54584GNB1Lguanine nucleotide binding protein (G protein), beta polypeptide 1-like181559341822246222q11.2
51233LOC51233hypothetical protein LOC51233222806392230448722q11.2
51586MED15mediator complex subunit 15191918861927191922q11.2
81061OR11H1olfactory receptor, family 11, subfamily H, member 1148288241482980422q11.2
27156RTDR1rhabdoid tumor deletion region gene 1217315932181424122q11.2
83733SLC25A18solute carrier family 25 (mitochondrial carrier), member 18164231831645364722q11.2
66035SLC2A11solute carrier family 2 (facilitated glucose transporter), member 11225290592255739022q11.2
80764THAP7THAP domain containing 7196840611968640422q11.2
51733UPB1ureidopropionase, beta232212512325255322q11.2
29799YPEL1yippee-like 1 (Drosophila)203818252042007122q11.2
84700MYO18Bmyosin XVIIIB244681202475700722q11.2-q12.1
1415CRYBB2crystallin, beta B2239456122395783622q11.2-q12.1|22q11.23
1417CRYBB3crystallin, beta B3239258252393332422q11.2-q12.1|22q11.23
1413CRYBA4crystallin, beta A4253479282535663622q11.2-q13.1|22q12.1
50487PLA2G3phospholipase A2, group III298607932986646922q11.2-q13.2
150209AIFM3apoptosis-inducing factor, mitochondrion-associated, 3196494341966564922q11.21
421ARVCFarmadillo repeat gene deletes in velocardiofacial syndrome183374191838430922q11.21
128989C22orf25chromosome 22 open reading frame 25183886311843344722q11.21
79680C22orf29chromosome 22 open reading frame 29182136611822237122q11.21
164592CCDC116coiled-coil domain containing 116203170862032161622q11.21
8318CDC45LCDC45 cell division cycle 45-like (S. cerevisiae)178474161788813522q11.21
7122CLDN5claudin 5178905501789286022q11.21
9993DGCR2DiGeorge syndrome critical region gene 2174037951748996722q11.21
400892FLJ42953breakpoint cluster region pseudogene197873051980657522q11.21
2928GSC2goosecoid homeobox 2175165041751779622q11.21
23119HIC2hypermethylated in cancer 2201016932013575222q11.21
84861KLHL22kelch-like 22 (Drosophila)191258061918012222q11.21
57553MICAL3microtubule associated monoxygenase, calponin and LIM domain containing 3167260851672767622q11.21
64976MRPL40mitochondrial ribosomal protein L40178000361780359822q11.21
55670PEX26peroxisomal biogenesis factor 26169407051695220722q11.21
5297PI4KAphosphatidylinositol 4-kinase, catalytic, alpha193919791954307022q11.21
23759PPIL2peptidylprolyl isomerase (cyclophilin)-like 2203502732038220222q11.21
5625PRODHproline dehydrogenase (oxidase) 1172802951730406622q11.21
5902RANBP1RAN binding protein 1184850241849470422q11.21
65078RTN4Rreticulon 4 receptor186089381863581622q11.21
91179SCARF2scavenger receptor class F, member 2191088751912214622q11.21
23753SDF2L1stromal cell-derived factor 2-like 1203265422032858822q11.21
5413SEPT5septin 5180819871809229722q11.21
6576SLC25A1solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1175430951754628522q11.21
6545SLC7A4solute carrier family 7 (cationic amino acid transporter, y+ system), member 4197130071971684722q11.21
9342SNAP29synaptosomal-associated protein, 29kDa195432921957410922q11.21
6899TBX1T-box 1181242261815111622q11.21
23617TSSK2testis-specific serine kinase 2174987901750013622q11.21
10587TXNRD2thioredoxin reductase 2182430401830935922q11.21
7332UBE2L3ubiquitin-conjugating enzyme E2L 3202519572030832322q11.21
7353UFD1Lubiquitin fusion degradation 1 like (yeast)178177011784672622q11.21
11274USP18ubiquitin specific peptidase 18170127581704016422q11.21
29801ZDHHC8zinc finger, DHHC-type containing 8184993651851397422q11.21
1312COMTcatechol-O-methyltransferase183093091833653022q11.21-q11.23|22q11.21
2812GP1BBglycoprotein Ib (platelet), beta polypeptide180910661809229722q11.21-q11.23|22q11.21
8214DGCR6DiGeorge syndrome critical region gene 6172737791727960122q11.21|22q11
8216LZTR1leucine-zipper-like transcription regulator 1196665581968332622q11.21|22q11.1-q11.2
8220DGCR14DiGeorge syndrome critical region gene 14174977921751219022q11.21|22q11.2
2781GNAZguanine nucleotide binding protein (G protein), alpha z polypeptide217426692179722422q11.22
9647PPM1Fprotein phosphatase 1F (PP2C domain containing)206037932063721722q11.22
23532PRAMEpreferentially expressed antigen in melanoma212201232123169622q11.22
9609RAB36RAB36, member RAS oncogene family218175132183653122q11.22
8940TOP3Btopoisomerase (DNA) III beta206414032066714722q11.22
129025ZNF280Azinc finger protein 280A211980602120461322q11.22
140883ZNF280Bzinc finger protein 280B211687672119350522q11.22
135ADORA2Aadenosine A2a receptor231535302316832522q11.23
150248C22orf15chromosome 22 open reading frame 15224352082243804722q11.23
388886C22orf36chromosome 22 open reading frame 36233115912331903522q11.23
23523CABIN1calcineurin binding protein 1227377652290459622q11.23
1652DDTD-dopachrome tautomerase226435542265201922q11.23
100037417DDTLD-dopachrome tautomerase-like226390262264474822q11.23
91319DERL3Der1-like domain family, member 3225066902251120122q11.23
2678GGT1gamma-glutamyltransferase 1233097182335497222q11.23
2952GSTT1glutathione S-transferase theta 1227061412271423122q11.23
653689GSTT2Bglutathione S-transferase theta 2B (gene/pseudogene)226296012263336822q11.23
3543IGLL1immunoglobulin lambda-like polypeptide 1222453122225249522q11.23
91355LRP5Llow density lipoprotein receptor-related protein 5-like240860492410755522q11.23
4282MIFmacrophage migration inhibitory factor (glycosylation-inhibiting factor)225665652256740922q11.23
440822PIWIL3piwi-like 3 (Drosophila)234450012350068322q11.23
129049SGSM1small G protein signaling modulator 1235321362365281322q11.23
6634SNRPD3small nuclear ribonucleoprotein D3 polypeptide 18kDa232816182329850922q11.23
23384SPECC1LSPECC1-like229968662314322122q11.23
6598SMARCB1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1224591502250670522q11.23|22q11
29802VPREB3pre-B lymphocyte 3224249322242659222q11.23|22q11

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