DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AATTS
Uniprot ID:
Q9BQ04
Source protein:
RNA-binding protein 4B
Source gene:
RBM4B
Class:
DEG_SPOP_SBC_1
Location:
292:296
E3 ligase:
SPOP
DEGRON score:
0.9588
ASA_SCORE:
79.56
COIL:
0.9018
CONS_SCORE:
0.3024
DSS_SCORE:
0.3243
HELIX:
0.0858
FCONS_SCORE:
0.7711
RIG_SCORE:
0.73
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A293T
TCGA-A6-6780
COAD
TCGA
AATTS
DEG_SPOP_SBC_1
0.6028
p.A293T
DO10244
COAD
ICGC
AATTS
DEG_SPOP_SBC_1
0.6028
p.A292T
TCGA-CG-5721
STAD
TCGA
AATTS
DEG_SPOP_SBC_1
0.7139
p.A292T
DO38192
STAD
ICGC
AATTS
DEG_SPOP_SBC_1
0.7139
p.P305Q
TCGA-D3-A2J6
SKCM
TCGA
AATTS
DEG_SPOP_SBC_1
0.0833
p.P305Q
DO37901
SKCM
ICGC
AATTS
DEG_SPOP_SBC_1
0.0833
p.D302G
TCGA-G4-6588
COAD
TCGA
AATTS
DEG_SPOP_SBC_1
0.1667
p.D302G
DO10140
COAD
ICGC
AATTS
DEG_SPOP_SBC_1
0.1667
p.S297C
TCGA-PL-A8LV
BRCA
TCGA
AATTS
DEG_SPOP_SBC_1
0.3056
p.S297C
DO51215
BRCA
ICGC
AATTS
DEG_SPOP_SBC_1
0.3056
p.A289T
DO233882
GACA
ICGC
AATTS
DEG_SPOP_SBC_1
0.25
p.D302N
DO222710
MELA
ICGC
AATTS
DEG_SPOP_SBC_1
0.1667
p.P305T
SIDM01943
Colorectal Carcinoma
GDSC
AATTS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with RBM4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AATTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75427
Leucine-rich repeat and calponin homology domain-containing protein 4
DEG_SPOP_SBC_1
17:21
AATTS
SPOP
0.9306
More...
O95263
High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B
DEG_SPOP_SBC_1
86:90
AATTS
SPOP
0.9159
More...
P10244
Myb-related protein B
DEG_SPOP_SBC_1
247:251
AATTS
SPOP
0.875
More...
P11161
E3 SUMO-protein ligase EGR2
DEG_SPOP_SBC_1
191:195
AATTS
SPOP
0.8235
More...
P42345
Serine/threonine-protein kinase mTOR
DEG_SPOP_SBC_1
12:16
AATTS
SPOP
0.9477
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2479:2483
AATTS
SPOP
0.779
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3087:3091
AATTS
SPOP
0.9865
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4268:4272
AATTS
SPOP
0.5679
More...
Q12955
Ankyrin-3
DEG_SPOP_SBC_1
527:531
AATTS
SPOP
0.9908
More...
Q15596
Nuclear receptor coactivator 2
DEG_SPOP_SBC_1
966:970
AATTS
SPOP
0.9712
More...
Q16665
Hypoxia-inducible factor 1-alpha
DEG_SPOP_SBC_1
745:749
AATTS
SPOP
0.8202
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
6971:6975
AATTS
SPOP
0.943
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7089:7093
AATTS
SPOP
0.981
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7590:7594
AATTS
SPOP
0.9515
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7702:7706
AATTS
SPOP
0.987
More...
Q86W56
Poly
DEG_SPOP_SBC_1
18:22
AATTS
SPOP
0.9919
More...
Q8N196
Homeobox protein SIX5
DEG_SPOP_SBC_1
626:630
AATTS
SPOP
0.921
More...
Q8N1N2
Dynactin-associated protein
DEG_SPOP_SBC_1
194:198
AATTS
SPOP
0.9824
More...
Q92766
Ras-responsive element-binding protein 1
DEG_SPOP_SBC_1
1118:1122
AATTS
SPOP
0.9724
More...
Q9BQ04
RNA-binding protein 4B
DEG_SPOP_SBC_1
292:296
AATTS
SPOP
0.9588
More...
Q9BWQ6
Protein YIPF2
DEG_SPOP_SBC_1
25:29
AATTS
SPOP
0.9948
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3496:3500
AATTS
SPOP
0.9359
More...
Q9NR56
Muscleblind-like protein 1
DEG_SPOP_SBC_1
352:356
AATTS
SPOP
0.9067
More...
Q9NV92
NEDD4 family-interacting protein 2
DEG_SPOP_SBC_1
65:69
AATTS
SPOP
0.9829
More...
Q9P270
SLAIN motif-containing protein 2
DEG_SPOP_SBC_1
294:298
AATTS
SPOP
0.9583
More...
Q9UER7
Death domain-associated protein 6
DEG_SPOP_SBC_1
148:152
AATTS
SPOP
0.9574
More...
Q9Y2D9
Zinc finger protein 652
DEG_SPOP_SBC_1
200:204
AATTS
SPOP
0.9314
More...