DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ADTSS
Uniprot ID:
P23759
Source protein:
Paired box protein Pax-7
Source gene:
PAX7
Class:
DEG_SPOP_SBC_1
Location:
346:350
E3 ligase:
SPOP
DEGRON score:
0.5936
ASA_SCORE:
59.14
COIL:
0.8432
CONS_SCORE:
0.4159
DSS_SCORE:
0.3713
HELIX:
0.1032
FCONS_SCORE:
0.9401
RIG_SCORE:
0.685
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A342V
TCGA-DU-6392
LGG
TCGA
ADTSS
DEG_SPOP_SBC_1
0.2222
p.A342V
DO22237
LGG
ICGC
ADTSS
DEG_SPOP_SBC_1
0.2222
p.R355H
TCGA-SL-A6JA
UCEC
TCGA
ADTSS
DEG_SPOP_SBC_1
0.1944
p.R355H
DO219787
UCEC
ICGC
ADTSS
DEG_SPOP_SBC_1
0.1944
p.L339R
DO233203
GACA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.1389
p.A351S
DO228948
LICA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.3056
p.A354G
SIDM00965
Small Cell Lung Carcinoma
GDSC
ADTSS
DEG_SPOP_SBC_1
0.2222
p.A354G
ACH-000800
Lung Cancer
CCLE
ADTSS
DEG_SPOP_SBC_1
0.2222
p.A354G
NCI-H446
lung
COSMIC
ADTSS
DEG_SPOP_SBC_1
0.2222
p.Y352C
ACH-001099
Rhabdoid
CCLE
ADTSS
DEG_SPOP_SBC_1
0.2778
p.A352G
NCI-H446
lung
COSMIC
ADTSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with PAX7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ADTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P23759
Paired box protein Pax-7
DEG_SPOP_SBC_1
346:350
ADTSS
SPOP
0.5936
More...
P35125
Ubiquitin carboxyl-terminal hydrolase 6
DEG_SPOP_SBC_1
1386:1390
ADTSS
SPOP
0.8488
More...
P49750
YLP motif-containing protein 1
DEG_SPOP_SBC_1
867:871
ADTSS
SPOP
0.9941
More...
Q13796
Protein Shroom2
DEG_SPOP_SBC_1
227:231
ADTSS
SPOP
0.9912
More...
Q6T4R5
Nance-Horan syndrome protein
DEG_SPOP_SBC_1
771:775
ADTSS
SPOP
0.8619
More...
Q6UVM3
Potassium channel subfamily T member 2
DEG_SPOP_SBC_1
636:640
ADTSS
SPOP
0.9248
More...
Q7Z417
Nuclear fragile X mental retardation-interacting protein 2
DEG_SPOP_SBC_1
604:608
ADTSS
SPOP
0.9979
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_SPOP_SBC_1
1584:1588
ADTSS
SPOP
0.6823
More...
Q96KM6
Zinc finger protein 512B
DEG_SPOP_SBC_1
382:386
ADTSS
SPOP
0.9081
More...
Q99708
DNA endonuclease RBBP8
DEG_SPOP_SBC_1
14:18
ADTSS
SPOP
0.8958
More...
Q9BYW2
Histone-lysine N-methyltransferase SETD2
DEG_SPOP_SBC_1
2460:2464
ADTSS
SPOP
0.8672
More...
Q9H2G2
STE20-like serine/threonine-protein kinase
DEG_SPOP_SBC_1
756:760
ADTSS
SPOP
0.982
More...
Q9Y3R5
Protein dopey-2
DEG_SPOP_SBC_1
1113:1117
ADTSS
SPOP
0.995
More...
Q9Y613
FH1/FH2 domain-containing protein 1
DEG_SPOP_SBC_1
430:434
ADTSS
SPOP
0.8521
More...
Q6ZMY6
WD repeat-containing protein 88
DEG_SPOP_SBC_1
449:453
ADTSS
SPOP
0.5826
More...