DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
ADTSS
Uniprot ID:
Q6ZMY6
Source protein:
WD repeat-containing protein 88
Source gene:
WDR88
Class:
DEG_SPOP_SBC_1
Location:
449:453
E3 ligase:
SPOP
DEGRON score:
0.5826
ASA_SCORE:
54.48
COIL:
0.8754
CONS_SCORE:
0.5434
DSS_SCORE:
0.6312
HELIX:
0.0396
FCONS_SCORE:
0.9631
RIG_SCORE:
0.6129
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R441Q
TCGA-D6-A6EP
HNSC
TCGA
ADTSS
DEG_SPOP_SBC_1
0.1111
p.R441Q
TCGA-E6-A2P9
UCEC
TCGA
ADTSS
DEG_SPOP_SBC_1
0.1111
p.R441Q
DO52084
HNSC
ICGC
ADTSS
DEG_SPOP_SBC_1
0.1111
p.R441Q
DO43714
UCEC
ICGC
ADTSS
DEG_SPOP_SBC_1
0.1111
p.R441Q
SIDM00952
B-Cell Non-Hodgkin's Lymphoma
GDSC
ADTSS
DEG_SPOP_SBC_1
0.1111
p.R441Q
ACH-002220
Lymphoma
CCLE
ADTSS
DEG_SPOP_SBC_1
0.1111
p.R441Q
CRO-AP2
haematopoietic_and_lymphoid_tissue
COSMIC
ADTSS
DEG_SPOP_SBC_1
0.1111
p.N462K
DO233736
GACA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.0833
p.G446V
DO229028
LICA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.25
p.C440F
DO229034
LICA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.0833
p.A449T
DO34448
PACA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.7139
p.R441W
SIDM01154
T-Lymphoblastic Leukemia
GDSC
ADTSS
DEG_SPOP_SBC_1
0.1111
p.R441W
ACH-000953
Leukemia
CCLE
ADTSS
DEG_SPOP_SBC_1
0.1111
p.R441W
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
ADTSS
DEG_SPOP_SBC_1
0.1111
p.T451I
SIDM00217
Colorectal Carcinoma
GDSC
ADTSS
DEG_SPOP_SBC_1
0.7078
p.T451I
SNU-1040
large_intestine
COSMIC
ADTSS
DEG_SPOP_SBC_1
0.7078
p.E461K
ACH-002509
Skin Cancer
CCLE
ADTSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with WDR88 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ADTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P23759
Paired box protein Pax-7
DEG_SPOP_SBC_1
346:350
ADTSS
SPOP
0.5936
More...
P35125
Ubiquitin carboxyl-terminal hydrolase 6
DEG_SPOP_SBC_1
1386:1390
ADTSS
SPOP
0.8488
More...
P49750
YLP motif-containing protein 1
DEG_SPOP_SBC_1
867:871
ADTSS
SPOP
0.9941
More...
Q13796
Protein Shroom2
DEG_SPOP_SBC_1
227:231
ADTSS
SPOP
0.9912
More...
Q6T4R5
Nance-Horan syndrome protein
DEG_SPOP_SBC_1
771:775
ADTSS
SPOP
0.8619
More...
Q6UVM3
Potassium channel subfamily T member 2
DEG_SPOP_SBC_1
636:640
ADTSS
SPOP
0.9248
More...
Q7Z417
Nuclear fragile X mental retardation-interacting protein 2
DEG_SPOP_SBC_1
604:608
ADTSS
SPOP
0.9979
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_SPOP_SBC_1
1584:1588
ADTSS
SPOP
0.6823
More...
Q96KM6
Zinc finger protein 512B
DEG_SPOP_SBC_1
382:386
ADTSS
SPOP
0.9081
More...
Q99708
DNA endonuclease RBBP8
DEG_SPOP_SBC_1
14:18
ADTSS
SPOP
0.8958
More...
Q9BYW2
Histone-lysine N-methyltransferase SETD2
DEG_SPOP_SBC_1
2460:2464
ADTSS
SPOP
0.8672
More...
Q9H2G2
STE20-like serine/threonine-protein kinase
DEG_SPOP_SBC_1
756:760
ADTSS
SPOP
0.982
More...
Q9Y3R5
Protein dopey-2
DEG_SPOP_SBC_1
1113:1117
ADTSS
SPOP
0.995
More...
Q9Y613
FH1/FH2 domain-containing protein 1
DEG_SPOP_SBC_1
430:434
ADTSS
SPOP
0.8521
More...
Q6ZMY6
WD repeat-containing protein 88
DEG_SPOP_SBC_1
449:453
ADTSS
SPOP
0.5826
More...