DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
ADTSS
Uniprot ID:
Q7Z417
Source protein:
Nuclear fragile X mental retardation-interacting protein 2
Source gene:
NUFIP2
Class:
DEG_SPOP_SBC_1
Location:
604:608
E3 ligase:
SPOP
DEGRON score:
0.9979
ASA_SCORE:
68.26
COIL:
0.707
CONS_SCORE:
0.4918
DSS_SCORE:
0.3649
HELIX:
0.1814
FCONS_SCORE:
1.0884
RIG_SCORE:
0.7026
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S608T
TCGA-AJ-A3EK
UCEC
TCGA
ADTSS
DEG_SPOP_SBC_1
0.7116
p.S608T
DO41584
UCEC
ICGC
ADTSS
DEG_SPOP_SBC_1
0.7116
p.H597N
DO228948
LICA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.1389
p.P595H
DO228974
LICA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.0833
p.Q602K
DO228976
LICA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.2778
p.Q602K
DO229029
LICA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.2778
p.L601M
DO229015
LICA
ICGC
ADTSS
DEG_SPOP_SBC_1
0.25
p.L601P
SIDM00683
Prostate Carcinoma
GDSC
ADTSS
DEG_SPOP_SBC_1
0.25
p.L601P
ACH-000977
lymph_node
CCLE
ADTSS
DEG_SPOP_SBC_1
0.25
p.L601P
LNCaP-Clone-FGC
prostate
COSMIC
ADTSS
DEG_SPOP_SBC_1
0.25
p.E594D
ACH-000786
Lymphoma
CCLE
ADTSS
DEG_SPOP_SBC_1
0.0556
p.E594D
ACH-000992
Head and Neck Cancer
CCLE
ADTSS
DEG_SPOP_SBC_1
0.0556
p.E594D
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
ADTSS
DEG_SPOP_SBC_1
0.0556
p.E594D
OCI-AML5
haematopoietic_and_lymphoid_tissue
COSMIC
ADTSS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with NUFIP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ADTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P23759
Paired box protein Pax-7
DEG_SPOP_SBC_1
346:350
ADTSS
SPOP
0.5936
More...
P35125
Ubiquitin carboxyl-terminal hydrolase 6
DEG_SPOP_SBC_1
1386:1390
ADTSS
SPOP
0.8488
More...
P49750
YLP motif-containing protein 1
DEG_SPOP_SBC_1
867:871
ADTSS
SPOP
0.9941
More...
Q13796
Protein Shroom2
DEG_SPOP_SBC_1
227:231
ADTSS
SPOP
0.9912
More...
Q6T4R5
Nance-Horan syndrome protein
DEG_SPOP_SBC_1
771:775
ADTSS
SPOP
0.8619
More...
Q6UVM3
Potassium channel subfamily T member 2
DEG_SPOP_SBC_1
636:640
ADTSS
SPOP
0.9248
More...
Q7Z417
Nuclear fragile X mental retardation-interacting protein 2
DEG_SPOP_SBC_1
604:608
ADTSS
SPOP
0.9979
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_SPOP_SBC_1
1584:1588
ADTSS
SPOP
0.6823
More...
Q96KM6
Zinc finger protein 512B
DEG_SPOP_SBC_1
382:386
ADTSS
SPOP
0.9081
More...
Q99708
DNA endonuclease RBBP8
DEG_SPOP_SBC_1
14:18
ADTSS
SPOP
0.8958
More...
Q9BYW2
Histone-lysine N-methyltransferase SETD2
DEG_SPOP_SBC_1
2460:2464
ADTSS
SPOP
0.8672
More...
Q9H2G2
STE20-like serine/threonine-protein kinase
DEG_SPOP_SBC_1
756:760
ADTSS
SPOP
0.982
More...
Q9Y3R5
Protein dopey-2
DEG_SPOP_SBC_1
1113:1117
ADTSS
SPOP
0.995
More...
Q9Y613
FH1/FH2 domain-containing protein 1
DEG_SPOP_SBC_1
430:434
ADTSS
SPOP
0.8521
More...
Q6ZMY6
WD repeat-containing protein 88
DEG_SPOP_SBC_1
449:453
ADTSS
SPOP
0.5826
More...