DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AKSSS
Uniprot ID:
O94762
Source protein:
ATP-dependent DNA helicase Q5
Source gene:
RECQL5
Class:
DEG_SPOP_SBC_1
Location:
732:736
E3 ligase:
SPOP
DEGRON score:
0.7563
ASA_SCORE:
83.02
COIL:
0.8976
CONS_SCORE:
0.2657
DSS_SCORE:
0.697
HELIX:
0.0458
FCONS_SCORE:
0.9006
RIG_SCORE:
0.5558
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L741F
TCGA-DI-A1BU
UCEC
TCGA
AKSSS
DEG_SPOP_SBC_1
0.1944
p.L741F
DO42023
UCEC
ICGC
AKSSS
DEG_SPOP_SBC_1
0.1944
p.P728L
TCGA-EE-A2MR
SKCM
TCGA
AKSSS
DEG_SPOP_SBC_1
0.2222
p.P728L
DO37819
SKCM
ICGC
AKSSS
DEG_SPOP_SBC_1
0.2222
p.H722Y
TCGA-NH-A6GB
COAD
TCGA
AKSSS
DEG_SPOP_SBC_1
0.0556
p.H722Y
DO50092
COAD
ICGC
AKSSS
DEG_SPOP_SBC_1
0.0556
p.G724E
TCGA-XV-AAZW
SKCM
TCGA
AKSSS
DEG_SPOP_SBC_1
0.1111
p.G724E
DO219495
SKCM
ICGC
AKSSS
DEG_SPOP_SBC_1
0.1111
p.R745Q
DO224798
BRCA
ICGC
AKSSS
DEG_SPOP_SBC_1
0.0833
p.R745Q
DO23322
LINC
ICGC
AKSSS
DEG_SPOP_SBC_1
0.0833
p.A732E
DO228939
LICA
ICGC
AKSSS
DEG_SPOP_SBC_1
0.7701
p.E729K
DO229544
UTCA
ICGC
AKSSS
DEG_SPOP_SBC_1
0.25
p.S734R
SIDM00545
Melanoma
GDSC
AKSSS
DEG_SPOP_SBC_1
0.7427
p.S734R
ACH-000987
Skin Cancer
CCLE
AKSSS
DEG_SPOP_SBC_1
0.7427
p.G725W
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
AKSSS
DEG_SPOP_SBC_1
0.1389
p.G725W
ACH-000945
Lung Cancer
CCLE
AKSSS
DEG_SPOP_SBC_1
0.1389
p.G725W
NCI-H650
lung
COSMIC
AKSSS
DEG_SPOP_SBC_1
0.1389
p.A729V
LIM1215
large_intestine
COSMIC
AKSSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with RECQL5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AKSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14647
Chromodomain-helicase-DNA-binding protein 2
DEG_SPOP_SBC_1
1432:1436
AKSSS
SPOP
0.9644
More...
O60885
Bromodomain-containing protein 4
DEG_SPOP_SBC_1
1217:1221
AKSSS
SPOP
0.9576
More...
O94762
ATP-dependent DNA helicase Q5
DEG_SPOP_SBC_1
732:736
AKSSS
SPOP
0.7563
More...
O95294
RasGAP-activating-like protein 1
DEG_SPOP_SBC_1
2:6
AKSSS
SPOP
0.7406
More...
P25440
Bromodomain-containing protein 2
DEG_SPOP_SBC_1
474:478
AKSSS
SPOP
0.6808
More...
Q14693
Phosphatidate phosphatase LPIN1
DEG_SPOP_SBC_1
282:286
AKSSS
SPOP
0.9674
More...
Q5VWN6
Protein TASOR 2
DEG_SPOP_SBC_1
1165:1169
AKSSS
SPOP
0.9726
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
755:759
AKSSS
SPOP
0.5292
More...
Q6PRD1
Probable G-protein coupled receptor 179
DEG_SPOP_SBC_1
906:910
AKSSS
SPOP
0.9545
More...
Q8NEY1
Neuron navigator 1
DEG_SPOP_SBC_1
677:681
AKSSS
SPOP
0.9854
More...
Q96PV6
Leukocyte receptor cluster member 8
DEG_SPOP_SBC_1
59:63
AKSSS
SPOP
0.9898
More...
Q9NWH9
SAFB-like transcription modulator
DEG_SPOP_SBC_1
351:355
AKSSS
SPOP
0.9894
More...
Q9NYV4
Cyclin-dependent kinase 12
DEG_SPOP_SBC_1
167:171
AKSSS
SPOP
0.989
More...
Q9P2N6
KAT8 regulatory NSL complex subunit 3
DEG_SPOP_SBC_1
698:702
AKSSS
SPOP
0.9382
More...
Q9Y692
Glucocorticoid modulatory element-binding protein 1
DEG_SPOP_SBC_1
455:459
AKSSS
SPOP
0.8751
More...
Q2TAC6
Kinesin-like protein KIF19
DEG_SPOP_SBC_1
720:724
AKSSS
SPOP
0.9422
More...
Q96BN6
Primary cilium assembly protein FAM149B1
DEG_SPOP_SBC_1
203:207
AKSSS
SPOP
0.9219
More...
Q5SYE7
NHS-like protein 1
DEG_SPOP_SBC_1
1146:1150
AKSSS
SPOP
0.9831
More...
Q6ZVL6
UPF0606 protein KIAA1549L
DEG_SPOP_SBC_1
676:680
AKSSS
SPOP
0.9984
More...
A6NCF6
Putative MAGE domain-containing protein MAGEA13P
DEG_SPOP_SBC_1
332:336
AKSSS
SPOP
0.9368
More...