DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AKSSS
Uniprot ID:
Q8NEY1
Source protein:
Neuron navigator 1
Source gene:
NAV1
Class:
DEG_SPOP_SBC_1
Location:
677:681
E3 ligase:
SPOP
DEGRON score:
0.9854
ASA_SCORE:
84.84
COIL:
0.901
CONS_SCORE:
0.5056
DSS_SCORE:
0.624
HELIX:
0.0712
FCONS_SCORE:
1.0704
RIG_SCORE:
0.6019
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P676A
TCGA-17-Z033
LUAD
TCGA
AKSSS
DEG_SPOP_SBC_1
0.3056
p.Q669K
TCGA-22-4609
LUSC
TCGA
AKSSS
DEG_SPOP_SBC_1
0.1111
p.Q669K
DO26838
LUSC
ICGC
AKSSS
DEG_SPOP_SBC_1
0.1111
p.R671H
TCGA-2W-A8YY
CESC
TCGA
AKSSS
DEG_SPOP_SBC_1
0.1667
p.R671H
DO223732
CESC
ICGC
AKSSS
DEG_SPOP_SBC_1
0.1667
p.R688Q
TCGA-A5-A0GI
UCEC
TCGA
AKSSS
DEG_SPOP_SBC_1
0.1389
p.E684K
DO219589
BRCA
ICGC
AKSSS
DEG_SPOP_SBC_1
0.25
p.M682I
DO233207
GACA
ICGC
AKSSS
DEG_SPOP_SBC_1
0.3056
p.S689Y
DO218946
LUAD
ICGC
AKSSS
DEG_SPOP_SBC_1
0.1111
p.V684M
SIDM01164
Glioma
GDSC
AKSSS
DEG_SPOP_SBC_1
0.25
p.V684M
SW1783
central_nervous_system
COSMIC
AKSSS
DEG_SPOP_SBC_1
0.25
p.G690A
SIDM01127
Non-Small Cell Lung Carcinoma
GDSC
AKSSS
DEG_SPOP_SBC_1
0.0833
p.G690A
NCI-H596
lung
COSMIC
AKSSS
DEG_SPOP_SBC_1
0.0833
p.L686R
ACH-001518
Endometrial/Uterine Cancer
CCLE
AKSSS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with NAV1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AKSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14647
Chromodomain-helicase-DNA-binding protein 2
DEG_SPOP_SBC_1
1432:1436
AKSSS
SPOP
0.9644
More...
O60885
Bromodomain-containing protein 4
DEG_SPOP_SBC_1
1217:1221
AKSSS
SPOP
0.9576
More...
O94762
ATP-dependent DNA helicase Q5
DEG_SPOP_SBC_1
732:736
AKSSS
SPOP
0.7563
More...
O95294
RasGAP-activating-like protein 1
DEG_SPOP_SBC_1
2:6
AKSSS
SPOP
0.7406
More...
P25440
Bromodomain-containing protein 2
DEG_SPOP_SBC_1
474:478
AKSSS
SPOP
0.6808
More...
Q14693
Phosphatidate phosphatase LPIN1
DEG_SPOP_SBC_1
282:286
AKSSS
SPOP
0.9674
More...
Q5VWN6
Protein TASOR 2
DEG_SPOP_SBC_1
1165:1169
AKSSS
SPOP
0.9726
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
755:759
AKSSS
SPOP
0.5292
More...
Q6PRD1
Probable G-protein coupled receptor 179
DEG_SPOP_SBC_1
906:910
AKSSS
SPOP
0.9545
More...
Q8NEY1
Neuron navigator 1
DEG_SPOP_SBC_1
677:681
AKSSS
SPOP
0.9854
More...
Q96PV6
Leukocyte receptor cluster member 8
DEG_SPOP_SBC_1
59:63
AKSSS
SPOP
0.9898
More...
Q9NWH9
SAFB-like transcription modulator
DEG_SPOP_SBC_1
351:355
AKSSS
SPOP
0.9894
More...
Q9NYV4
Cyclin-dependent kinase 12
DEG_SPOP_SBC_1
167:171
AKSSS
SPOP
0.989
More...
Q9P2N6
KAT8 regulatory NSL complex subunit 3
DEG_SPOP_SBC_1
698:702
AKSSS
SPOP
0.9382
More...
Q9Y692
Glucocorticoid modulatory element-binding protein 1
DEG_SPOP_SBC_1
455:459
AKSSS
SPOP
0.8751
More...
Q2TAC6
Kinesin-like protein KIF19
DEG_SPOP_SBC_1
720:724
AKSSS
SPOP
0.9422
More...
Q96BN6
Primary cilium assembly protein FAM149B1
DEG_SPOP_SBC_1
203:207
AKSSS
SPOP
0.9219
More...
Q5SYE7
NHS-like protein 1
DEG_SPOP_SBC_1
1146:1150
AKSSS
SPOP
0.9831
More...
Q6ZVL6
UPF0606 protein KIAA1549L
DEG_SPOP_SBC_1
676:680
AKSSS
SPOP
0.9984
More...
A6NCF6
Putative MAGE domain-containing protein MAGEA13P
DEG_SPOP_SBC_1
332:336
AKSSS
SPOP
0.9368
More...