DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
AKSSS
Uniprot ID:
Q9Y692
Source protein:
Glucocorticoid modulatory element-binding protein 1
Source gene:
GMEB1
Class:
DEG_SPOP_SBC_1
Location:
455:459
E3 ligase:
SPOP
DEGRON score:
0.8751
ASA_SCORE:
81.94
COIL:
0.8584
CONS_SCORE:
0.2295
DSS_SCORE:
0.3577
HELIX:
0.0658
FCONS_SCORE:
0.8363
RIG_SCORE:
0.6205
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R447S
TCGA-AX-A2HC
UCEC
TCGA
AKSSS
DEG_SPOP_SBC_1
0.1111
p.T462P
TCGA-BT-A42C
BLCA
TCGA
AKSSS
DEG_SPOP_SBC_1
0.25
p.H466Q
TCGA-E2-A1B6
BRCA
TCGA
AKSSS
DEG_SPOP_SBC_1
0.1389
p.R447H
TCGA-EA-A3HS
CESC
TCGA
AKSSS
DEG_SPOP_SBC_1
0.1111
p.R447H
SIDM00828
Other Sarcomas
GDSC
AKSSS
DEG_SPOP_SBC_1
0.1111
p.R447H
SIDM00500
Colorectal Carcinoma
GDSC
AKSSS
DEG_SPOP_SBC_1
0.1111
p.R447H
HT-1080
soft_tissue
COSMIC
AKSSS
DEG_SPOP_SBC_1
0.1111
p.T452P
DO49725
BLCA
ICGC
AKSSS
DEG_SPOP_SBC_1
0.25
p.A462V
DO52630
BOCA
ICGC
AKSSS
DEG_SPOP_SBC_1
0.25
p.H456Q
DO5493
BRCA
ICGC
AKSSS
DEG_SPOP_SBC_1
0.7582
p.S448I
DO229036
LICA
ICGC
AKSSS
DEG_SPOP_SBC_1
0.1389
p.K446N
DO50917
LICA
ICGC
AKSSS
DEG_SPOP_SBC_1
0.0833
p.K446N
ACH-000769
Lung Cancer
CCLE
AKSSS
DEG_SPOP_SBC_1
0.0833
p.K446N
LK-2
lung
COSMIC
AKSSS
DEG_SPOP_SBC_1
0.0833
p.S458N
SIDM00845
Burkitt's Lymphoma
GDSC
AKSSS
DEG_SPOP_SBC_1
0.7069
p.S458N
SIDM00461
Acute Myeloid Leukemia
GDSC
AKSSS
DEG_SPOP_SBC_1
0.7069
p.S458N
SIDM01519
Head and Neck Carcinoma
GDSC
AKSSS
DEG_SPOP_SBC_1
0.7069
p.K456N
SIDM00548
Squamous Cell Lung Carcinoma
GDSC
AKSSS
DEG_SPOP_SBC_1
0.5806
p.K456N
LK-2
lung
COSMIC
AKSSS
DEG_SPOP_SBC_1
0.5806
p.S448N
ACH-000992
Head and Neck Cancer
CCLE
AKSSS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with GMEB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AKSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14647
Chromodomain-helicase-DNA-binding protein 2
DEG_SPOP_SBC_1
1432:1436
AKSSS
SPOP
0.9644
More...
O60885
Bromodomain-containing protein 4
DEG_SPOP_SBC_1
1217:1221
AKSSS
SPOP
0.9576
More...
O94762
ATP-dependent DNA helicase Q5
DEG_SPOP_SBC_1
732:736
AKSSS
SPOP
0.7563
More...
O95294
RasGAP-activating-like protein 1
DEG_SPOP_SBC_1
2:6
AKSSS
SPOP
0.7406
More...
P25440
Bromodomain-containing protein 2
DEG_SPOP_SBC_1
474:478
AKSSS
SPOP
0.6808
More...
Q14693
Phosphatidate phosphatase LPIN1
DEG_SPOP_SBC_1
282:286
AKSSS
SPOP
0.9674
More...
Q5VWN6
Protein TASOR 2
DEG_SPOP_SBC_1
1165:1169
AKSSS
SPOP
0.9726
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
755:759
AKSSS
SPOP
0.5292
More...
Q6PRD1
Probable G-protein coupled receptor 179
DEG_SPOP_SBC_1
906:910
AKSSS
SPOP
0.9545
More...
Q8NEY1
Neuron navigator 1
DEG_SPOP_SBC_1
677:681
AKSSS
SPOP
0.9854
More...
Q96PV6
Leukocyte receptor cluster member 8
DEG_SPOP_SBC_1
59:63
AKSSS
SPOP
0.9898
More...
Q9NWH9
SAFB-like transcription modulator
DEG_SPOP_SBC_1
351:355
AKSSS
SPOP
0.9894
More...
Q9NYV4
Cyclin-dependent kinase 12
DEG_SPOP_SBC_1
167:171
AKSSS
SPOP
0.989
More...
Q9P2N6
KAT8 regulatory NSL complex subunit 3
DEG_SPOP_SBC_1
698:702
AKSSS
SPOP
0.9382
More...
Q9Y692
Glucocorticoid modulatory element-binding protein 1
DEG_SPOP_SBC_1
455:459
AKSSS
SPOP
0.8751
More...
Q2TAC6
Kinesin-like protein KIF19
DEG_SPOP_SBC_1
720:724
AKSSS
SPOP
0.9422
More...
Q96BN6
Primary cilium assembly protein FAM149B1
DEG_SPOP_SBC_1
203:207
AKSSS
SPOP
0.9219
More...
Q5SYE7
NHS-like protein 1
DEG_SPOP_SBC_1
1146:1150
AKSSS
SPOP
0.9831
More...
Q6ZVL6
UPF0606 protein KIAA1549L
DEG_SPOP_SBC_1
676:680
AKSSS
SPOP
0.9984
More...
A6NCF6
Putative MAGE domain-containing protein MAGEA13P
DEG_SPOP_SBC_1
332:336
AKSSS
SPOP
0.9368
More...