DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ALSTS
Uniprot ID:
O15055
Source protein:
Period circadian protein homolog 2
Source gene:
PER2
Class:
DEG_SPOP_SBC_1
Location:
1049:1053
E3 ligase:
SPOP
DEGRON score:
0.9657
ASA_SCORE:
73.62
COIL:
0.7146
CONS_SCORE:
0.4639
DSS_SCORE:
0.5105
HELIX:
0.2504
FCONS_SCORE:
1.2129
RIG_SCORE:
0.6938
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1042L
TCGA-MP-A4TK
LUAD
TCGA
ALSTS
DEG_SPOP_SBC_1
0.1389
p.S1042L
DO45384
LUAD
ICGC
ALSTS
DEG_SPOP_SBC_1
0.1389
p.S1047T
DO48398
BLCA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.2778
p.A1049T
DO233203
GACA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.7139
p.A1049T
DO233760
GACA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.7139
p.A1049T
SIDM00572
Gastric Carcinoma
GDSC
ALSTS
DEG_SPOP_SBC_1
0.7139
p.A1049T
ACH-000911
Gastric Cancer
CCLE
ALSTS
DEG_SPOP_SBC_1
0.7139
p.A1049T
NUGC-3
stomach
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.7139
p.N1046K
DO229018
LICA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.25
p.E1063D
DO232761
PBCA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.0556
p.D1048N
SIDM00353
Other Sarcomas
GDSC
ALSTS
DEG_SPOP_SBC_1
0.3056
p.D1048N
SIDM01259
B-Lymphoblastic Leukemia
GDSC
ALSTS
DEG_SPOP_SBC_1
0.3056
p.D1048N
ACH-000505
Sarcoma
CCLE
ALSTS
DEG_SPOP_SBC_1
0.3056
p.D1048N
ACH-001669
Leukemia
CCLE
ALSTS
DEG_SPOP_SBC_1
0.3056
p.D1048N
ACH-002238
Leukemia
CCLE
ALSTS
DEG_SPOP_SBC_1
0.3056
p.D1048N
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.3056
p.D1048N
RKN
ovary
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with PER2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15055
Period circadian protein homolog 2
DEG_SPOP_SBC_1
1049:1053
ALSTS
SPOP
0.9657
More...
P04198
N-myc proto-oncogene protein
DEG_SPOP_SBC_1
251:255
ALSTS
SPOP
0.9983
More...
P85298
Rho GTPase-activating protein 8
DEG_SPOP_SBC_1
7:11
ALSTS
SPOP
0.6295
More...
Q14190
Single-minded homolog 2
DEG_SPOP_SBC_1
359:363
ALSTS
SPOP
0.9978
More...
Q8IZL2
Mastermind-like protein 2
DEG_SPOP_SBC_1
397:401
ALSTS
SPOP
0.9214
More...
Q92558
Wiskott-Aldrich syndrome protein family member 1
DEG_SPOP_SBC_1
334:338
ALSTS
SPOP
0.8439
More...
Q96F81
Protein dispatched homolog 1
DEG_SPOP_SBC_1
1157:1161
ALSTS
SPOP
0.6075
More...
Q96QB1
Rho GTPase-activating protein 7
DEG_SPOP_SBC_1
372:376
ALSTS
SPOP
0.9989
More...
Q99593
T-box transcription factor TBX5
DEG_SPOP_SBC_1
280:284
ALSTS
SPOP
0.7853
More...
Q9H0U6
39S ribosomal protein L18, mitochondrial
DEG_SPOP_SBC_1
23:27
ALSTS
SPOP
0.8755
More...
Q8WUT4
Leucine-rich repeat neuronal protein 4
DEG_SPOP_SBC_1
89:93
ALSTS
SPOP
0.8851
More...
Q8IZM8
Zinc finger protein 654
DEG_SPOP_SBC_1
532:536
ALSTS
SPOP
0.8723
More...
Q8NDW4
Zinc finger protein 248
DEG_SPOP_SBC_1
575:579
ALSTS
SPOP
0.9962
More...