DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ALSTS
Uniprot ID:
Q96QB1
Source protein:
Rho GTPase-activating protein 7
Source gene:
DLC1
Class:
DEG_SPOP_SBC_1
Location:
372:376
E3 ligase:
SPOP
DEGRON score:
0.9989
ASA_SCORE:
71.76
COIL:
0.6898
CONS_SCORE:
0.3148
DSS_SCORE:
0.6206
HELIX:
0.2914
FCONS_SCORE:
1.1353
RIG_SCORE:
0.6417
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T382R
TCGA-56-8308
LUSC
TCGA
ALSTS
DEG_SPOP_SBC_1
0.1667
p.T382R
DO219140
LUSC
ICGC
ALSTS
DEG_SPOP_SBC_1
0.1667
p.D366H
TCGA-60-2695
LUSC
TCGA
ALSTS
DEG_SPOP_SBC_1
0.1667
p.D366H
DO26665
LUSC
ICGC
ALSTS
DEG_SPOP_SBC_1
0.1667
p.Q367K
TCGA-70-6722
LUSC
TCGA
ALSTS
DEG_SPOP_SBC_1
0.1944
p.Q367K
TCGA-E7-A7DV
BLCA
TCGA
ALSTS
DEG_SPOP_SBC_1
0.1944
p.Q367K
DO48583
BLCA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.1944
p.Q367K
DO27755
LUSC
ICGC
ALSTS
DEG_SPOP_SBC_1
0.1944
p.L373I
TCGA-AX-A2HD
UCEC
TCGA
ALSTS
DEG_SPOP_SBC_1
0.6063
p.L373I
DO42608
UCEC
ICGC
ALSTS
DEG_SPOP_SBC_1
0.6063
p.A372T
TCGA-EO-A3AV
UCEC
TCGA
ALSTS
DEG_SPOP_SBC_1
0.7139
p.A372T
DO52412
UCEC
ICGC
ALSTS
DEG_SPOP_SBC_1
0.7139
p.D368N
DO228246
BRCA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.2222
p.E362K
DO1073
BRCA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.0556
p.T368M
DO8447
COAD
ICGC
ALSTS
DEG_SPOP_SBC_1
0.2222
p.D368E
DO222588
COCA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.2222
p.S374R
DO218243
GACA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.8538
p.Y364S
DO233760
GACA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.1111
p.P383Q
DO228952
LICA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.1389
p.P378S
DO51761
STAD
ICGC
ALSTS
DEG_SPOP_SBC_1
0.2778
p.P383S
SIDM01175
Other Sarcomas
GDSC
ALSTS
DEG_SPOP_SBC_1
0.1389
p.P383S
ACH-002309
Sarcoma
CCLE
ALSTS
DEG_SPOP_SBC_1
0.1389
p.P383S
SW684
soft_tissue
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.1389
p.N380S
OCI-LY7
haematopoietic_and_lymphoid_tissue
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.2222
p.N380S
D-423MG
central_nervous_system
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.2222
p.D377Y
LS-411N
large_intestine
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.3056
p.R368W
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.2222
p.N380K
DU-145
prostate
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with DLC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15055
Period circadian protein homolog 2
DEG_SPOP_SBC_1
1049:1053
ALSTS
SPOP
0.9657
More...
P04198
N-myc proto-oncogene protein
DEG_SPOP_SBC_1
251:255
ALSTS
SPOP
0.9983
More...
P85298
Rho GTPase-activating protein 8
DEG_SPOP_SBC_1
7:11
ALSTS
SPOP
0.6295
More...
Q14190
Single-minded homolog 2
DEG_SPOP_SBC_1
359:363
ALSTS
SPOP
0.9978
More...
Q8IZL2
Mastermind-like protein 2
DEG_SPOP_SBC_1
397:401
ALSTS
SPOP
0.9214
More...
Q92558
Wiskott-Aldrich syndrome protein family member 1
DEG_SPOP_SBC_1
334:338
ALSTS
SPOP
0.8439
More...
Q96F81
Protein dispatched homolog 1
DEG_SPOP_SBC_1
1157:1161
ALSTS
SPOP
0.6075
More...
Q96QB1
Rho GTPase-activating protein 7
DEG_SPOP_SBC_1
372:376
ALSTS
SPOP
0.9989
More...
Q99593
T-box transcription factor TBX5
DEG_SPOP_SBC_1
280:284
ALSTS
SPOP
0.7853
More...
Q9H0U6
39S ribosomal protein L18, mitochondrial
DEG_SPOP_SBC_1
23:27
ALSTS
SPOP
0.8755
More...
Q8WUT4
Leucine-rich repeat neuronal protein 4
DEG_SPOP_SBC_1
89:93
ALSTS
SPOP
0.8851
More...
Q8IZM8
Zinc finger protein 654
DEG_SPOP_SBC_1
532:536
ALSTS
SPOP
0.8723
More...
Q8NDW4
Zinc finger protein 248
DEG_SPOP_SBC_1
575:579
ALSTS
SPOP
0.9962
More...