DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ALSTS
Uniprot ID:
Q9H0U6
Source protein:
39S ribosomal protein L18, mitochondrial
Source gene:
MRPL18
Class:
DEG_SPOP_SBC_1
Location:
23:27
E3 ligase:
SPOP
DEGRON score:
0.8755
ASA_SCORE:
60.74
COIL:
0.6328
CONS_SCORE:
0.3323
DSS_SCORE:
0.3528
HELIX:
0.062
FCONS_SCORE:
1.1851
RIG_SCORE:
0.7092
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A32V
TCGA-A6-5661
COAD
TCGA
ALSTS
DEG_SPOP_SBC_1
0.1944
p.A32V
DO8634
COAD
ICGC
ALSTS
DEG_SPOP_SBC_1
0.1944
p.A32V
DO229018
LICA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.1944
p.D37G
TCGA-FI-A2D5
UCEC
TCGA
ALSTS
DEG_SPOP_SBC_1
0.0556
p.D37G
DO41331
UCEC
ICGC
ALSTS
DEG_SPOP_SBC_1
0.0556
p.S27N
DO52661
MALY
ICGC
ALSTS
DEG_SPOP_SBC_1
0.7069
p.S27R
DO232224
PBCA
ICGC
ALSTS
DEG_SPOP_SBC_1
0.7427
p.F21L
SIDM00661
B-Cell Non-Hodgkin's Lymphoma
GDSC
ALSTS
DEG_SPOP_SBC_1
0.2778
p.F21L
ACH-000914
Lymphoma
CCLE
ALSTS
DEG_SPOP_SBC_1
0.2778
p.F21L
HT
haematopoietic_and_lymphoid_tissue
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.2778
p.D37H
SIDM01186
Breast Carcinoma
GDSC
ALSTS
DEG_SPOP_SBC_1
0.0556
p.D37H
ACH-000554
Breast Cancer
CCLE
ALSTS
DEG_SPOP_SBC_1
0.0556
p.D37H
UACC-893
breast
COSMIC
ALSTS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with MRPL18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15055
Period circadian protein homolog 2
DEG_SPOP_SBC_1
1049:1053
ALSTS
SPOP
0.9657
More...
P04198
N-myc proto-oncogene protein
DEG_SPOP_SBC_1
251:255
ALSTS
SPOP
0.9983
More...
P85298
Rho GTPase-activating protein 8
DEG_SPOP_SBC_1
7:11
ALSTS
SPOP
0.6295
More...
Q14190
Single-minded homolog 2
DEG_SPOP_SBC_1
359:363
ALSTS
SPOP
0.9978
More...
Q8IZL2
Mastermind-like protein 2
DEG_SPOP_SBC_1
397:401
ALSTS
SPOP
0.9214
More...
Q92558
Wiskott-Aldrich syndrome protein family member 1
DEG_SPOP_SBC_1
334:338
ALSTS
SPOP
0.8439
More...
Q96F81
Protein dispatched homolog 1
DEG_SPOP_SBC_1
1157:1161
ALSTS
SPOP
0.6075
More...
Q96QB1
Rho GTPase-activating protein 7
DEG_SPOP_SBC_1
372:376
ALSTS
SPOP
0.9989
More...
Q99593
T-box transcription factor TBX5
DEG_SPOP_SBC_1
280:284
ALSTS
SPOP
0.7853
More...
Q9H0U6
39S ribosomal protein L18, mitochondrial
DEG_SPOP_SBC_1
23:27
ALSTS
SPOP
0.8755
More...
Q8WUT4
Leucine-rich repeat neuronal protein 4
DEG_SPOP_SBC_1
89:93
ALSTS
SPOP
0.8851
More...
Q8IZM8
Zinc finger protein 654
DEG_SPOP_SBC_1
532:536
ALSTS
SPOP
0.8723
More...
Q8NDW4
Zinc finger protein 248
DEG_SPOP_SBC_1
575:579
ALSTS
SPOP
0.9962
More...