DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
APTST
Uniprot ID:
Q9H2X6
Source protein:
Homeodomain-interacting protein kinase 2
Source gene:
HIPK2
Class:
DEG_SPOP_SBC_1
Location:
903:907
E3 ligase:
SPOP
DEGRON score:
0.9701
ASA_SCORE:
75.04
COIL:
0.8756
CONS_SCORE:
0.3269
DSS_SCORE:
0.6546
HELIX:
0.1062
FCONS_SCORE:
0.9304
RIG_SCORE:
0.6856
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E897G
TCGA-02-2483
GBM
TCGA
APTST
DEG_SPOP_SBC_1
0.1667
p.E897G
DO12352
GBM
ICGC
APTST
DEG_SPOP_SBC_1
0.1667
p.E898K
TCGA-A3-3378
KIRC
TCGA
APTST
DEG_SPOP_SBC_1
0.1944
p.E896D
TCGA-AA-3492
COAD
TCGA
APTST
DEG_SPOP_SBC_1
0.1389
p.E896D
TCGA-EY-A215
UCEC
TCGA
APTST
DEG_SPOP_SBC_1
0.1389
p.E896D
DO8224
COAD
ICGC
APTST
DEG_SPOP_SBC_1
0.1389
p.E896D
DO233109
GACA
ICGC
APTST
DEG_SPOP_SBC_1
0.1389
p.E896D
DO42665
UCEC
ICGC
APTST
DEG_SPOP_SBC_1
0.1389
p.D895G
TCGA-BR-4361
STAD
TCGA
APTST
DEG_SPOP_SBC_1
0.1111
p.D895G
DO38887
STAD
ICGC
APTST
DEG_SPOP_SBC_1
0.1111
p.A903V
DO233903
GACA
ICGC
APTST
DEG_SPOP_SBC_1
0.5825
p.T894K
DO228952
LICA
ICGC
APTST
DEG_SPOP_SBC_1
0.0833
p.S900Y
DO229029
LICA
ICGC
APTST
DEG_SPOP_SBC_1
0.25
p.L899I
DO229028
LICA
ICGC
APTST
DEG_SPOP_SBC_1
0.2222
p.H902Q
DO229037
LICA
ICGC
APTST
DEG_SPOP_SBC_1
0.3056
p.E899K
DO50904
LICA
ICGC
APTST
DEG_SPOP_SBC_1
0.2222
p.E896K
SIDM00217
Colorectal Carcinoma
GDSC
APTST
DEG_SPOP_SBC_1
0.1389
p.E896K
ACH-000999
Colon/Colorectal Cancer
CCLE
APTST
DEG_SPOP_SBC_1
0.1389
p.E896K
SNU-1040
large_intestine
COSMIC
APTST
DEG_SPOP_SBC_1
0.1389
p.N914K
SIDM00145
T-Lymphoblastic Leukemia
GDSC
APTST
DEG_SPOP_SBC_1
0.1389
p.N914K
ACH-001127
Leukemia
CCLE
APTST
DEG_SPOP_SBC_1
0.1389
p.N914K
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
APTST
DEG_SPOP_SBC_1
0.1389
p.T894A
ACH-001063
Ovarian Cancer
CCLE
APTST
DEG_SPOP_SBC_1
0.0833
p.R914C
NU-DUL-1
haematopoietic_and_lymphoid_tissue
COSMIC
APTST
DEG_SPOP_SBC_1
0.1389
Drug responses associated with HIPK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00926
UNCLASSIFIED|lung_NSCLC_not_specified
p.E136D (No)
GDSC
PI-103
186.6479
SIDM00951
LAML|acute_myeloid_leukaemia
p.D502N (No)
GDSC
PI-103
1.081
SIDM00951
LAML|acute_myeloid_leukaemia
p.I227T (No)
GDSC
PI-103
1.081
SIDM00939
UNCLASSIFIED|lung_NSCLC_not_specified
p.G1184V (No)
GDSC
PI-103
0.1231
SIDM00680
COREAD|large_intestine
p.R554Q (No)
GDSC
PI-103
131.335
SIDM01045
UCEC|endometrium
p.L59fs*56 (No)
GDSC
PI-103
3.7811
SIDM00499
PRAD|prostate
p.G45D (No)
GDSC
PI-103
0.3537
SIDM00145
ALL|lymphoblastic_leukemia
p.N914K (Yes)
GDSC
PI-103
0.1685
SIDM00108
SKCM|melanoma
p.H322Q (No)
GDSC
PI-103
2.1752
SIDM00351
HNSC|head_and_neck
p.R868W (No)
GDSC
PI-103
1.0036
SIDM00976
SKCM|melanoma
p.G348R (No)
GDSC
PI-103
0.2229
SIDM00045
STAD|stomach
p.C658F (No)
GDSC
PI-103
0.7557
SIDM01107
SKCM|melanoma
p.T602P (No)
GDSC
PI-103
57.4273
SIDM01007
ALL|lymphoblastic_leukemia
p.H807R (No)
GDSC
PI-103
0.2023
SIDM01007
ALL|lymphoblastic_leukemia
p.K805R (No)
GDSC
PI-103
0.2023
SIDM01073
UNCLASSIFIED|hairy_cell_leukaemia
p.S142N (No)
GDSC
PI-103
0.2031
SIDM00742
LUAD|lung_NSCLC_adenocarcinoma
p.H760R (No)
GDSC
PI-103
2.0651
SIDM00565
HNSC|head_and_neck
p.V737M (No)
GDSC
PI-103
2.2952
SIDM00443
DLBC|B_cell_lymphoma
p.R941C (No)
GDSC
PI-103
0.0219
SIDM00377
UNCLASSIFIED|uterus
p.H540R (No)
GDSC
PI-103
2.6284
SIDM00498
COREAD|large_intestine
p.I603V (No)
GDSC
PI-103
3.2887
SIDM00793
UNCLASSIFIED|Burkitt_lymphoma
p.A624V (No)
GDSC
PI-103
0.0783
SIDM01045
UCEC|endometrium
p.V94E (No)
GDSC
PI-103
3.7811
SIDM00946
ALL|T_cell_leukemia
p.V50M (No)
GDSC
PI-103
0.526
SIDM00864
CESC|cervix
p.I875V (No)
GDSC
PI-103
23.1182
SIDM00523
SCLC|lung_small_cell_carcinoma
p.R433S (No)
GDSC
PI-103
131.0205
SIDM00217
COREAD|large_intestine
p.A1178V (No)
GDSC
PI-103
1.8634
SIDM00217
COREAD|large_intestine
p.E896K (Yes)
GDSC
PI-103
1.8634
SIDM01003
ALL|lymphoblastic_leukemia
p.R497Q (No)
GDSC
PI-103
0.2158
SIDM00216
COREAD|large_intestine
p.I146T (No)
GDSC
PI-103
20.9452
SIDM00596
UCEC|endometrium
p.R498Q (No)
GDSC
PI-103
22.6646
SIDM00282
COREAD|large_intestine
p.A719S (No)
GDSC
PI-103
28.6572
SIDM00660
COREAD|large_intestine
p.A512V (No)
GDSC
PI-103
0.5852
SIDM00955
SKCM|melanoma
p.T1022N (No)
GDSC
PI-103
14.8056
SIDM00783
COREAD|large_intestine
p.R792W (No)
GDSC
PI-103
0.5867
SIDM00845
UNCLASSIFIED|Burkitt_lymphoma
p.I33V (No)
GDSC
PI-103
0.0974
SIDM00789
COREAD|large_intestine
p.V67I (No)
GDSC
PI-103
0.8427
SIDM00534
COREAD|large_intestine
p.V1121A (No)
GDSC
PI-103
137.3337
SIDM00149
SKCM|melanoma
p.M635I (No)
GDSC
PI-103
3.9173
SIDM00545
SKCM|melanoma
p.R1056Q (No)
GDSC
PI-103
9.7833
SIDM00545
SKCM|melanoma
p.H524Y (No)
GDSC
PI-103
9.7833
SIDM00114
MESO|mesothelioma
p.L716I (No)
GDSC
PI-103
6.8017
SIDM01154
ALL|lymphoblastic_T_cell_leukaemia
p.R133H (No)
GDSC
PI-103
0.976
SIDM00451
ALL|lymphoblastic_T_cell_leukaemia
p.L108F (No)
GDSC
PI-103
0.2536
SIDM00339
LUAD|lung_NSCLC_adenocarcinoma
p.S317I (No)
GDSC
PI-103
17.6642
SIDM01018
UNCLASSIFIED|Hodgkin_lymphoma
p.F500V (No)
GDSC
PI-103
1.0649
SIDM01018
UNCLASSIFIED|Hodgkin_lymphoma
p.Y468N (No)
GDSC
PI-103
1.0649
SIDM00537
COREAD|large_intestine
p.T125A (No)
GDSC
PI-103
32.6383
SIDM00799
GBM|glioma
p.S1002Y (No)
GDSC
PI-103
54.1746
SIDM00496
THCA|thyroid
p.Q747K (No)
GDSC
PI-103
0.4742
SIDM00878
BRCA|breast
p.R833C (No)
GDSC
PI-103
0.1835
All proteins holding degron of APTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15068
Guanine nucleotide exchange factor DBS
DEG_SPOP_SBC_1
970:974
APTST
SPOP
0.8568
More...
O15446
DNA-directed RNA polymerase I subunit RPA34
DEG_SPOP_SBC_1
417:421
APTST
SPOP
0.8174
More...
O94993
Transcription factor SOX-30
DEG_SPOP_SBC_1
725:729
APTST
SPOP
0.9793
More...
P16220
Cyclic AMP-responsive element-binding protein 1
DEG_SPOP_SBC_1
243:247
APTST
SPOP
0.9982
More...
P51532
Transcription activator BRG1
DEG_SPOP_SBC_1
294:298
APTST
SPOP
0.9108
More...
P54727
UV excision repair protein RAD23 homolog B
DEG_SPOP_SBC_1
118:122
APTST
SPOP
0.9799
More...
P56270
Myc-associated zinc finger protein
DEG_SPOP_SBC_1
166:170
APTST
SPOP
0.7258
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3763:3767
APTST
SPOP
0.9554
More...
Q15303
Receptor tyrosine-protein kinase erbB-4
DEG_SPOP_SBC_1
1083:1087
APTST
SPOP
0.9967
More...
Q5VT06
Centrosome-associated protein 350
DEG_SPOP_SBC_1
51:55
APTST
SPOP
0.925
More...
Q70E73
Ras-associated and pleckstrin homology domains-containing protein 1
DEG_SPOP_SBC_1
787:791
APTST
SPOP
0.9144
More...
Q8IV63
Inactive serine/threonine-protein kinase VRK3
DEG_SPOP_SBC_1
184:188
APTST
SPOP
0.8522
More...
Q8IW00
V-set and transmembrane domain-containing protein 4 [Cleaved into: Peptide Lv]
DEG_SPOP_SBC_1
304:308
APTST
SPOP
0.9964
More...
Q8NEZ2
Vacuolar protein sorting-associated protein 37A
DEG_SPOP_SBC_1
131:135
APTST
SPOP
0.7089
More...
Q8WUU4
Zinc finger protein 296
DEG_SPOP_SBC_1
312:316
APTST
SPOP
0.9874
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12979:12983
APTST
SPOP
0.9309
More...
Q96F05
Uncharacterized protein C11orf24
DEG_SPOP_SBC_1
168:172
APTST
SPOP
0.9958
More...
Q9C000
NACHT, LRR and PYD domains-containing protein 1
DEG_SPOP_SBC_1
176:180
APTST
SPOP
0.8015
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
903:907
APTST
SPOP
0.9701
More...
Q9UL54
Serine/threonine-protein kinase TAO2
DEG_SPOP_SBC_1
446:450
APTST
SPOP
0.9351
More...
Q5SXM8
DNL-type zinc finger protein
DEG_SPOP_SBC_1
154:158
APTST
SPOP
0.6422
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
403:407
APTST
SPOP
0.9592
More...
A6NMZ2
Sentan
DEG_SPOP_SBC_1
24:28
APTST
SPOP
0.9862
More...