DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
APTTT
Uniprot ID:
O15054
Source protein:
Lysine-specific demethylase 6B
Source gene:
KDM6B
Class:
DEG_SPOP_SBC_1
Location:
741:745
E3 ligase:
SPOP
DEGRON score:
0.9972
ASA_SCORE:
85.52
COIL:
0.9552
CONS_SCORE:
0.4461
DSS_SCORE:
0.6412
HELIX:
0.0276
FCONS_SCORE:
1.1246
RIG_SCORE:
0.6732
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L732V
TCGA-66-2785
LUSC
TCGA
APTTT
DEG_SPOP_SBC_1
0.0833
p.L732V
DO26520
LUSC
ICGC
APTTT
DEG_SPOP_SBC_1
0.0833
p.P747A
TCGA-FD-A3SP
BLCA
TCGA
APTTT
DEG_SPOP_SBC_1
0.2778
p.P747A
DO594
BLCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.A741G
DO48221
ESCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.754
p.D739E
DO233298
NACA
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.A741V
DO232224
PBCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.5825
p.P742T
DO229221
THCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.5919
p.P747L
SIDM00333
Endometrial Carcinoma
GDSC
APTTT
DEG_SPOP_SBC_1
0.2778
p.P747L
MFE-319
endometrium
COSMIC
APTTT
DEG_SPOP_SBC_1
0.2778
p.P735L
ACH-002349
Non-Cancerous
CCLE
APTTT
DEG_SPOP_SBC_1
0.1667
Drug responses associated with KDM6B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1L4H1
Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
DEG_SPOP_SBC_1
1556:1560
APTTT
SPOP
0.999
More...
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
777:781
APTTT
SPOP
0.9974
More...
O00257
E3 SUMO-protein ligase CBX4
DEG_SPOP_SBC_1
510:514
APTTT
SPOP
0.9085
More...
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
741:745
APTTT
SPOP
0.9972
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1822:1826
APTTT
SPOP
0.9757
More...
O96005
Cleft lip and palate transmembrane protein 1
DEG_SPOP_SBC_1
626:630
APTTT
SPOP
0.9015
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1323:1327
APTTT
SPOP
0.628
More...
Q5T4S7
E3 ubiquitin-protein ligase UBR4
DEG_SPOP_SBC_1
2466:2470
APTTT
SPOP
0.88
More...
Q6SA08
Testis-specific serine/threonine-protein kinase 4
DEG_SPOP_SBC_1
10:14
APTTT
SPOP
0.7213
More...
Q6UXF1
Transmembrane protein 108
DEG_SPOP_SBC_1
265:269
APTTT
SPOP
0.9989
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
382:386
APTTT
SPOP
0.9417
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
397:401
APTTT
SPOP
0.7673
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
413:417
APTTT
SPOP
0.8995
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
421:425
APTTT
SPOP
0.9979
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
507:511
APTTT
SPOP
0.9358
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
523:527
APTTT
SPOP
0.9092
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
530:534
APTTT
SPOP
0.9944
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
538:542
APTTT
SPOP
0.9813
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
593:597
APTTT
SPOP
0.9962
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
734:738
APTTT
SPOP
0.6542
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
803:807
APTTT
SPOP
0.9052
More...
Q96AE4
Far upstream element-binding protein 1
DEG_SPOP_SBC_1
559:563
APTTT
SPOP
0.9606
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
800:804
APTTT
SPOP
0.9952
More...
Q9Y5Y7
Lymphatic vessel endothelial hyaluronic acid receptor 1
DEG_SPOP_SBC_1
180:184
APTTT
SPOP
0.926
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
384:388
APTTT
SPOP
0.9984
More...