DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
APTTT
Uniprot ID:
Q92954
Source protein:
Proteoglycan 4
Source gene:
PRG4
Class:
DEG_SPOP_SBC_1
Location:
538:542
E3 ligase:
SPOP
DEGRON score:
0.9813
ASA_SCORE:
98.46
COIL:
0.9678
CONS_SCORE:
0.205
DSS_SCORE:
0.7756
HELIX:
0.0124
FCONS_SCORE:
0.5487
RIG_SCORE:
0.5831
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P546S
TCGA-HT-8109
LGG
TCGA
APTTT
DEG_SPOP_SBC_1
0.2222
p.P546S
DO22183
LGG
ICGC
APTTT
DEG_SPOP_SBC_1
0.2222
p.E536K
DO229250
THCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.P537S
SIDM01304
Colorectal Carcinoma
GDSC
APTTT
DEG_SPOP_SBC_1
0.3056
p.P537S
SIDM00803
Kidney Carcinoma
GDSC
APTTT
DEG_SPOP_SBC_1
0.3056
p.T542P
ACH-000411
Kidney Cancer
CCLE
APTTT
DEG_SPOP_SBC_1
0.7031
p.T542P
ACH-001347
Head and Neck Cancer
CCLE
APTTT
DEG_SPOP_SBC_1
0.7031
p.T542P
ACH-001430
Bone Cancer
CCLE
APTTT
DEG_SPOP_SBC_1
0.7031
p.S544P
ACH-000693
Esophageal Cancer
CCLE
APTTT
DEG_SPOP_SBC_1
0.7222
p.S544P
KYSE-180
oesophagus
COSMIC
APTTT
DEG_SPOP_SBC_1
0.7222
p.A540T
SK-GT-2
stomach
COSMIC
APTTT
DEG_SPOP_SBC_1
0.7139
p.A540T
NCI-N87
stomach
COSMIC
APTTT
DEG_SPOP_SBC_1
0.7139
p.T551N
D-566MG
central_nervous_system
COSMIC
APTTT
DEG_SPOP_SBC_1
0.0833
p.T535P
CW-2
large_intestine
COSMIC
APTTT
DEG_SPOP_SBC_1
0.3611
p.K538E
SK-GT-2
stomach
COSMIC
APTTT
DEG_SPOP_SBC_1
0.7022
p.E537Q
QIMR-WIL
haematopoietic_and_lymphoid_tissue
COSMIC
APTTT
DEG_SPOP_SBC_1
0.3056
p.P547L
SU-DHL-8
NS
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1944
p.A548T
NCI-H1693
lung
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PRG4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1L4H1
Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
DEG_SPOP_SBC_1
1556:1560
APTTT
SPOP
0.999
More...
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
777:781
APTTT
SPOP
0.9974
More...
O00257
E3 SUMO-protein ligase CBX4
DEG_SPOP_SBC_1
510:514
APTTT
SPOP
0.9085
More...
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
741:745
APTTT
SPOP
0.9972
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1822:1826
APTTT
SPOP
0.9757
More...
O96005
Cleft lip and palate transmembrane protein 1
DEG_SPOP_SBC_1
626:630
APTTT
SPOP
0.9015
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1323:1327
APTTT
SPOP
0.628
More...
Q5T4S7
E3 ubiquitin-protein ligase UBR4
DEG_SPOP_SBC_1
2466:2470
APTTT
SPOP
0.88
More...
Q6SA08
Testis-specific serine/threonine-protein kinase 4
DEG_SPOP_SBC_1
10:14
APTTT
SPOP
0.7213
More...
Q6UXF1
Transmembrane protein 108
DEG_SPOP_SBC_1
265:269
APTTT
SPOP
0.9989
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
382:386
APTTT
SPOP
0.9417
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
397:401
APTTT
SPOP
0.7673
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
413:417
APTTT
SPOP
0.8995
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
421:425
APTTT
SPOP
0.9979
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
507:511
APTTT
SPOP
0.9358
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
523:527
APTTT
SPOP
0.9092
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
530:534
APTTT
SPOP
0.9944
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
538:542
APTTT
SPOP
0.9813
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
593:597
APTTT
SPOP
0.9962
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
734:738
APTTT
SPOP
0.6542
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
803:807
APTTT
SPOP
0.9052
More...
Q96AE4
Far upstream element-binding protein 1
DEG_SPOP_SBC_1
559:563
APTTT
SPOP
0.9606
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
800:804
APTTT
SPOP
0.9952
More...
Q9Y5Y7
Lymphatic vessel endothelial hyaluronic acid receptor 1
DEG_SPOP_SBC_1
180:184
APTTT
SPOP
0.926
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
384:388
APTTT
SPOP
0.9984
More...