DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
APTTT
Uniprot ID:
Q92954
Source protein:
Proteoglycan 4
Source gene:
PRG4
Class:
DEG_SPOP_SBC_1
Location:
507:511
E3 ligase:
SPOP
DEGRON score:
0.9358
ASA_SCORE:
96.76
COIL:
0.961
CONS_SCORE:
0.43
DSS_SCORE:
0.823
HELIX:
0.0142
FCONS_SCORE:
0.8967
RIG_SCORE:
0.5372
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P508H
TCGA-33-4566
LUSC
TCGA
APTTT
DEG_SPOP_SBC_1
0.6583
p.P508H
DO26790
LUSC
ICGC
APTTT
DEG_SPOP_SBC_1
0.6583
p.P519L
TCGA-55-A490
LUAD
TCGA
APTTT
DEG_SPOP_SBC_1
0.1111
p.P519L
DO24596
LUAD
ICGC
APTTT
DEG_SPOP_SBC_1
0.1111
p.T510A
TCGA-BR-4368
STAD
TCGA
APTTT
DEG_SPOP_SBC_1
0.7139
p.T510A
DO38715
STAD
ICGC
APTTT
DEG_SPOP_SBC_1
0.7139
p.K504N
TCGA-P3-A6T2
HNSC
TCGA
APTTT
DEG_SPOP_SBC_1
0.3611
p.K504N
DO49034
HNSC
ICGC
APTTT
DEG_SPOP_SBC_1
0.3611
p.T511P
DO222718
COCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.8142
p.T511P
DO222839
COCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.8142
p.T511P
DO230548
LUSC
ICGC
APTTT
DEG_SPOP_SBC_1
0.8142
p.T511P
DO231067
LUSC
ICGC
APTTT
DEG_SPOP_SBC_1
0.8142
p.A507S
DO230554
LUSC
ICGC
APTTT
DEG_SPOP_SBC_1
0.7588
p.A507S
KYSE-180
oesophagus
COSMIC
APTTT
DEG_SPOP_SBC_1
0.7588
p.S515A
DO230554
LUSC
ICGC
APTTT
DEG_SPOP_SBC_1
0.2222
p.K504E
DO229216
THCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.3611
p.P503H
SIDM00282
Colorectal Carcinoma
GDSC
APTTT
DEG_SPOP_SBC_1
0.2222
p.P503H
ACH-000998
Colon/Colorectal Cancer
CCLE
APTTT
DEG_SPOP_SBC_1
0.2222
p.P503H
CW-2
large_intestine
COSMIC
APTTT
DEG_SPOP_SBC_1
0.2222
p.T517I
SIDM00709
Non-Small Cell Lung Carcinoma
GDSC
APTTT
DEG_SPOP_SBC_1
0.1667
p.T517I
ACH-000451
Lung Cancer
CCLE
APTTT
DEG_SPOP_SBC_1
0.1667
p.T517I
ACH-001547
Lung Cancer
CCLE
APTTT
DEG_SPOP_SBC_1
0.1667
p.P506S
SIDM01443
Gastric Carcinoma
GDSC
APTTT
DEG_SPOP_SBC_1
0.3056
p.T521I
KINGS-1
central_nervous_system
COSMIC
APTTT
DEG_SPOP_SBC_1
0.0556
p.S501P
KYSE-180
oesophagus
COSMIC
APTTT
DEG_SPOP_SBC_1
0.6111
p.S510A
HeLa
cervix
COSMIC
APTTT
DEG_SPOP_SBC_1
0.7588
p.S510A
MOLT-16
haematopoietic_and_lymphoid_tissue
COSMIC
APTTT
DEG_SPOP_SBC_1
0.7588
p.A520S
KM12
large_intestine
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1944
p.S512A
HeLa
cervix
COSMIC
APTTT
DEG_SPOP_SBC_1
0.3056
p.S512A
MOLT-16
haematopoietic_and_lymphoid_tissue
COSMIC
APTTT
DEG_SPOP_SBC_1
0.3056
p.A518S
KM12
large_intestine
COSMIC
APTTT
DEG_SPOP_SBC_1
0.5833
p.S503P
KYSE-180
oesophagus
COSMIC
APTTT
DEG_SPOP_SBC_1
0.2222
Drug responses associated with PRG4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1L4H1
Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
DEG_SPOP_SBC_1
1556:1560
APTTT
SPOP
0.999
More...
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
777:781
APTTT
SPOP
0.9974
More...
O00257
E3 SUMO-protein ligase CBX4
DEG_SPOP_SBC_1
510:514
APTTT
SPOP
0.9085
More...
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
741:745
APTTT
SPOP
0.9972
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1822:1826
APTTT
SPOP
0.9757
More...
O96005
Cleft lip and palate transmembrane protein 1
DEG_SPOP_SBC_1
626:630
APTTT
SPOP
0.9015
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1323:1327
APTTT
SPOP
0.628
More...
Q5T4S7
E3 ubiquitin-protein ligase UBR4
DEG_SPOP_SBC_1
2466:2470
APTTT
SPOP
0.88
More...
Q6SA08
Testis-specific serine/threonine-protein kinase 4
DEG_SPOP_SBC_1
10:14
APTTT
SPOP
0.7213
More...
Q6UXF1
Transmembrane protein 108
DEG_SPOP_SBC_1
265:269
APTTT
SPOP
0.9989
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
382:386
APTTT
SPOP
0.9417
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
397:401
APTTT
SPOP
0.7673
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
413:417
APTTT
SPOP
0.8995
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
421:425
APTTT
SPOP
0.9979
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
507:511
APTTT
SPOP
0.9358
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
523:527
APTTT
SPOP
0.9092
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
530:534
APTTT
SPOP
0.9944
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
538:542
APTTT
SPOP
0.9813
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
593:597
APTTT
SPOP
0.9962
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
734:738
APTTT
SPOP
0.6542
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
803:807
APTTT
SPOP
0.9052
More...
Q96AE4
Far upstream element-binding protein 1
DEG_SPOP_SBC_1
559:563
APTTT
SPOP
0.9606
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
800:804
APTTT
SPOP
0.9952
More...
Q9Y5Y7
Lymphatic vessel endothelial hyaluronic acid receptor 1
DEG_SPOP_SBC_1
180:184
APTTT
SPOP
0.926
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
384:388
APTTT
SPOP
0.9984
More...