DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
APTTT
Uniprot ID:
Q92954
Source protein:
Proteoglycan 4
Source gene:
PRG4
Class:
DEG_SPOP_SBC_1
Location:
593:597
E3 ligase:
SPOP
DEGRON score:
0.9962
ASA_SCORE:
98.36
COIL:
0.963
CONS_SCORE:
0.4469
DSS_SCORE:
0.8109
HELIX:
0.0144
FCONS_SCORE:
1.0844
RIG_SCORE:
0.5532
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P605H
TCGA-A4-7583
KIRP
TCGA
APTTT
DEG_SPOP_SBC_1
0.1111
p.P605H
DO20870
KIRP
ICGC
APTTT
DEG_SPOP_SBC_1
0.1111
p.P605L
TCGA-AX-A1CE
UCEC
TCGA
APTTT
DEG_SPOP_SBC_1
0.1111
p.P605L
DO42280
UCEC
ICGC
APTTT
DEG_SPOP_SBC_1
0.1111
p.E591G
TCGA-B5-A0K9
UCEC
TCGA
APTTT
DEG_SPOP_SBC_1
0.2778
p.E591G
DO42097
UCEC
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.K599Q
TCGA-EE-A3AG
SKCM
TCGA
APTTT
DEG_SPOP_SBC_1
0.2778
p.K599Q
DO37471
SKCM
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.K599E
DO48444
BLCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.K599E
DO228918
LICA
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.K599E
DO228923
LICA
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.K599E
DO228978
LICA
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.K599E
DO228985
LICA
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.K599E
DO229058
LICA
ICGC
APTTT
DEG_SPOP_SBC_1
0.2778
p.T597P
DO224628
COCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.8142
p.T597P
DO228961
LICA
ICGC
APTTT
DEG_SPOP_SBC_1
0.8142
p.T597P
DO228985
LICA
ICGC
APTTT
DEG_SPOP_SBC_1
0.8142
p.T597P
DO231186
LUSC
ICGC
APTTT
DEG_SPOP_SBC_1
0.8142
p.T597P
DO228011
SKCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.8142
p.T604A
DO229013
COCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.1389
p.T604A
DO229016
COCA
ICGC
APTTT
DEG_SPOP_SBC_1
0.1389
p.T604A
DO229047
LICA
ICGC
APTTT
DEG_SPOP_SBC_1
0.1389
p.T604A
DO52365
LUSC
ICGC
APTTT
DEG_SPOP_SBC_1
0.1389
p.P600S
DO228944
LICA
ICGC
APTTT
DEG_SPOP_SBC_1
0.25
p.A585S
DO228944
LICA
ICGC
APTTT
DEG_SPOP_SBC_1
0.1111
p.T601N
D-566MG
central_nervous_system
COSMIC
APTTT
DEG_SPOP_SBC_1
0.2222
p.P603T
SK-NEP-1
kidney
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1667
p.P603T
451Lu
skin
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1667
p.P603T
HCC-15
lung
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1667
p.P603T
U031
kidney
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1667
p.P603T
COLO-824
breast
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1667
p.P603T
MFE-319
endometrium
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1667
p.T585P
CW-2
large_intestine
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1111
p.P597L
SU-DHL-8
NS
COSMIC
APTTT
DEG_SPOP_SBC_1
0.7582
p.A598T
NCI-H1693
lung
COSMIC
APTTT
DEG_SPOP_SBC_1
0.3056
p.A590T
NCI-N87
stomach
COSMIC
APTTT
DEG_SPOP_SBC_1
0.3611
p.A590T
SK-GT-2
stomach
COSMIC
APTTT
DEG_SPOP_SBC_1
0.3611
p.E587Q
QIMR-WIL
haematopoietic_and_lymphoid_tissue
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1667
p.E589Q
QIMR-WIL
haematopoietic_and_lymphoid_tissue
COSMIC
APTTT
DEG_SPOP_SBC_1
0.2222
p.K590E
SK-GT-2
stomach
COSMIC
APTTT
DEG_SPOP_SBC_1
0.3611
p.A592T
SK-GT-2
stomach
COSMIC
APTTT
DEG_SPOP_SBC_1
0.3056
p.A592T
NCI-N87
stomach
COSMIC
APTTT
DEG_SPOP_SBC_1
0.3056
p.T603N
D-566MG
central_nervous_system
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1667
p.T587P
CW-2
large_intestine
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1667
p.P599L
SU-DHL-8
NS
COSMIC
APTTT
DEG_SPOP_SBC_1
0.2778
p.K588E
SK-GT-2
stomach
COSMIC
APTTT
DEG_SPOP_SBC_1
0.1944
p.A600T
NCI-H1693
lung
COSMIC
APTTT
DEG_SPOP_SBC_1
0.25
Drug responses associated with PRG4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1L4H1
Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
DEG_SPOP_SBC_1
1556:1560
APTTT
SPOP
0.999
More...
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
777:781
APTTT
SPOP
0.9974
More...
O00257
E3 SUMO-protein ligase CBX4
DEG_SPOP_SBC_1
510:514
APTTT
SPOP
0.9085
More...
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
741:745
APTTT
SPOP
0.9972
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1822:1826
APTTT
SPOP
0.9757
More...
O96005
Cleft lip and palate transmembrane protein 1
DEG_SPOP_SBC_1
626:630
APTTT
SPOP
0.9015
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1323:1327
APTTT
SPOP
0.628
More...
Q5T4S7
E3 ubiquitin-protein ligase UBR4
DEG_SPOP_SBC_1
2466:2470
APTTT
SPOP
0.88
More...
Q6SA08
Testis-specific serine/threonine-protein kinase 4
DEG_SPOP_SBC_1
10:14
APTTT
SPOP
0.7213
More...
Q6UXF1
Transmembrane protein 108
DEG_SPOP_SBC_1
265:269
APTTT
SPOP
0.9989
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
382:386
APTTT
SPOP
0.9417
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
397:401
APTTT
SPOP
0.7673
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
413:417
APTTT
SPOP
0.8995
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
421:425
APTTT
SPOP
0.9979
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
507:511
APTTT
SPOP
0.9358
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
523:527
APTTT
SPOP
0.9092
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
530:534
APTTT
SPOP
0.9944
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
538:542
APTTT
SPOP
0.9813
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
593:597
APTTT
SPOP
0.9962
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
734:738
APTTT
SPOP
0.6542
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
803:807
APTTT
SPOP
0.9052
More...
Q96AE4
Far upstream element-binding protein 1
DEG_SPOP_SBC_1
559:563
APTTT
SPOP
0.9606
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
800:804
APTTT
SPOP
0.9952
More...
Q9Y5Y7
Lymphatic vessel endothelial hyaluronic acid receptor 1
DEG_SPOP_SBC_1
180:184
APTTT
SPOP
0.926
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
384:388
APTTT
SPOP
0.9984
More...