DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CPH
CGC
Degron:
ATSST
Uniprot ID:
Q15858
Source protein:
Sodium channel protein type 9 subunit alpha
Source gene:
SCN9A
Class:
DEG_SPOP_SBC_1
Location:
1948:1952
E3 ligase:
SPOP
DEGRON score:
0.9534
ASA_SCORE:
81.98
COIL:
0.9608
CONS_SCORE:
0.2696
DSS_SCORE:
0.7299
HELIX:
0.0202
FCONS_SCORE:
0.955
RIG_SCORE:
0.5538
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1961H
TCGA-85-A4QQ
LUSC
TCGA
ATSST
DEG_SPOP_SBC_1
0.0833
p.Y1947H
TCGA-CV-7434
HNSC
TCGA
ATSST
DEG_SPOP_SBC_1
0.3056
p.S1943Y
TCGA-D3-A1Q3
SKCM
TCGA
ATSST
DEG_SPOP_SBC_1
0.1944
p.R1962K
TCGA-EB-A41A
SKCM
TCGA
ATSST
DEG_SPOP_SBC_1
0.0556
p.N1940S
DO8842
COAD
ICGC
ATSST
DEG_SPOP_SBC_1
0.1111
p.D1947N
DO222579
ESCA
ICGC
ATSST
DEG_SPOP_SBC_1
0.3056
p.S1951F
DO222810
MELA
ICGC
ATSST
DEG_SPOP_SBC_1
0.7982
p.S1951F
CP66-MEL
skin
COSMIC
ATSST
DEG_SPOP_SBC_1
0.7982
p.S1950L
DO50724
ORCA
ICGC
ATSST
DEG_SPOP_SBC_1
0.8778
p.T1946R
DO223272
SARC
ICGC
ATSST
DEG_SPOP_SBC_1
0.2778
p.T1946R
KNS-81-FD
central_nervous_system
COSMIC
ATSST
DEG_SPOP_SBC_1
0.2778
p.T1946R
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
ATSST
DEG_SPOP_SBC_1
0.2778
p.S1954Y
DO47509
SKCM
ICGC
ATSST
DEG_SPOP_SBC_1
0.2778
p.E1939D
DO41644
UCEC
ICGC
ATSST
DEG_SPOP_SBC_1
0.0833
p.T1946A
DO43891
UCEC
ICGC
ATSST
DEG_SPOP_SBC_1
0.2778
p.S1940F
SIDM00190
Melanoma
GDSC
ATSST
DEG_SPOP_SBC_1
0.1111
p.S1940F
ACH-002097
Skin Cancer
CCLE
ATSST
DEG_SPOP_SBC_1
0.1111
p.S1940F
CP66-MEL
skin
COSMIC
ATSST
DEG_SPOP_SBC_1
0.1111
p.P1953T
SIDM00925
Non-Small Cell Lung Carcinoma
GDSC
ATSST
DEG_SPOP_SBC_1
0.3056
p.P1953T
ACH-000638
Lung Cancer
CCLE
ATSST
DEG_SPOP_SBC_1
0.3056
p.P1953T
NCI-H441
lung
COSMIC
ATSST
DEG_SPOP_SBC_1
0.3056
p.P1944S
ACH-001410
Bladder Cancer
CCLE
ATSST
DEG_SPOP_SBC_1
0.2222
p.P1953L
ACH-002044
Head and Neck Cancer
CCLE
ATSST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with SCN9A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ATSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10243
Myb-related protein A
DEG_SPOP_SBC_1
742:746
ATSST
SPOP
0.8838
More...
P42566
Epidermal growth factor receptor substrate 15
DEG_SPOP_SBC_1
667:671
ATSST
SPOP
0.9758
More...
Q14684
Ribosomal RNA processing protein 1 homolog B
DEG_SPOP_SBC_1
450:454
ATSST
SPOP
0.9979
More...
Q14980
Nuclear mitotic apparatus protein 1
DEG_SPOP_SBC_1
1850:1854
ATSST
SPOP
0.9984
More...
Q15858
Sodium channel protein type 9 subunit alpha
DEG_SPOP_SBC_1
1948:1952
ATSST
SPOP
0.9534
More...
Q5VWN6
Protein TASOR 2
DEG_SPOP_SBC_1
545:549
ATSST
SPOP
0.9791
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3201:3205
ATSST
SPOP
0.7972
More...
Q6ZS17
Rho family-interacting cell polarization regulator 1
DEG_SPOP_SBC_1
508:512
ATSST
SPOP
0.9552
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
6355:6359
ATSST
SPOP
0.9855
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
6643:6647
ATSST
SPOP
0.9478
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
6733:6737
ATSST
SPOP
0.9478
More...
Q8IXK0
Polyhomeotic-like protein 2
DEG_SPOP_SBC_1
16:20
ATSST
SPOP
0.8574
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
922:926
ATSST
SPOP
0.9792
More...
Q9C0G6
Dynein axonemal heavy chain 6
DEG_SPOP_SBC_1
116:120
ATSST
SPOP
0.9908
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4375:4379
ATSST
SPOP
0.8031
More...
Q9NP66
High mobility group protein 20A
DEG_SPOP_SBC_1
42:46
ATSST
SPOP
0.9289
More...
Q9P2D1
Chromodomain-helicase-DNA-binding protein 7
DEG_SPOP_SBC_1
2451:2455
ATSST
SPOP
0.9815
More...
Q96KR1
Zinc finger RNA-binding protein
DEG_SPOP_SBC_1
431:435
ATSST
SPOP
0.9583
More...
Q86XN7
Proline and serine-rich protein 1
DEG_SPOP_SBC_1
727:731
ATSST
SPOP
0.9852
More...