DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PASTT
Uniprot ID:
P54727
Source protein:
UV excision repair protein RAD23 homolog B
Source gene:
RAD23B
Class:
DEG_SPOP_SBC_1
Location:
93:97
E3 ligase:
SPOP
DEGRON score:
0.9667
ASA_SCORE:
86.76
COIL:
0.9174
CONS_SCORE:
0.1458
DSS_SCORE:
0.5457
HELIX:
0.0478
FCONS_SCORE:
0.9279
RIG_SCORE:
0.6584
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T87A
DO228597
LICA
ICGC
PASTT
DEG_SPOP_SBC_1
0.1667
p.A94S
DO229015
LICA
ICGC
PASTT
DEG_SPOP_SBC_1
0.6477
p.A94S
SIDM00567
Other Solid Cancers
GDSC
PASTT
DEG_SPOP_SBC_1
0.6477
p.A94S
ACH-000776
Brain Cancer
CCLE
PASTT
DEG_SPOP_SBC_1
0.6477
p.A94S
ONS-76
central_nervous_system
COSMIC
PASTT
DEG_SPOP_SBC_1
0.6477
p.P85L
DO229052
LICA
ICGC
PASTT
DEG_SPOP_SBC_1
0.1111
p.S96L
ST486
haematopoietic_and_lymphoid_tissue
COSMIC
PASTT
DEG_SPOP_SBC_1
0.7667
Drug responses associated with RAD23B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PASTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
983:987
PASTT
SPOP
0.9313
More...
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
988:992
PASTT
SPOP
0.889
More...
P11161
E3 SUMO-protein ligase EGR2
DEG_SPOP_SBC_1
127:131
PASTT
SPOP
0.9571
More...
P20810
Calpastatin
DEG_SPOP_SBC_1
547:551
PASTT
SPOP
0.9976
More...
P54727
UV excision repair protein RAD23 homolog B
DEG_SPOP_SBC_1
93:97
PASTT
SPOP
0.9667
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2297:2301
PASTT
SPOP
0.6997
More...
P98171
Rho GTPase-activating protein 4
DEG_SPOP_SBC_1
894:898
PASTT
SPOP
0.9571
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1511:1515
PASTT
SPOP
0.6572
More...
Q08999
Retinoblastoma-like protein 2
DEG_SPOP_SBC_1
674:678
PASTT
SPOP
0.9981
More...
Q5THR3
EF-hand calcium-binding domain-containing protein 6
DEG_SPOP_SBC_1
1295:1299
PASTT
SPOP
0.9774
More...
Q6BAA4
Fc receptor-like B
DEG_SPOP_SBC_1
294:298
PASTT
SPOP
0.9844
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
358:362
PASTT
SPOP
0.974
More...
Q99607
ETS-related transcription factor Elf-4
DEG_SPOP_SBC_1
433:437
PASTT
SPOP
0.7975
More...
Q9BR76
Coronin-1B
DEG_SPOP_SBC_1
429:433
PASTT
SPOP
0.9688
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1644:1648
PASTT
SPOP
0.9635
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
4925:4929
PASTT
SPOP
0.9738
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
4981:4985
PASTT
SPOP
0.7062
More...
Q9Y692
Glucocorticoid modulatory element-binding protein 1
DEG_SPOP_SBC_1
385:389
PASTT
SPOP
0.947
More...
A6NMD0
Interferon-induced transmembrane protein 10
DEG_SPOP_SBC_1
42:46
PASTT
SPOP
0.9896
More...