DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPIY
Uniprot ID:
O94929
Source protein:
Actin-binding LIM protein 3
Source gene:
ABLIM3
Class:
ITCH
Location:
444:447
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9628
ASA_SCORE:
71.25
COIL:
0.8725
CONS_SCORE:
0.4298
DSS_SCORE:
0.5417
HELIX:
0.0768
FCONS_SCORE:
1.1233
RIG_SCORE:
0.7397
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R449W
TCGA-AP-A056
UCEC
TCGA
PPIY
ITCH
0.2778
p.R449W
TCGA-AX-A2HD
UCEC
TCGA
PPIY
ITCH
0.2778
p.R449W
TCGA-HT-A5RC
LGG
TCGA
PPIY
ITCH
0.2778
p.R449W
DO48525
LGG
ICGC
PPIY
ITCH
0.2778
p.R449W
DO42608
UCEC
ICGC
PPIY
ITCH
0.2778
p.R449W
DO43971
UCEC
ICGC
PPIY
ITCH
0.2778
p.N439S
TCGA-B5-A0JY
UCEC
TCGA
PPIY
ITCH
0.1944
p.N439S
DO43041
UCEC
ICGC
PPIY
ITCH
0.1944
p.R442Q
TCGA-DM-A1D7
COAD
TCGA
PPIY
ITCH
0.2778
p.R442Q
DO10044
COAD
ICGC
PPIY
ITCH
0.2778
p.R442Q
DO233893
GACA
ICGC
PPIY
ITCH
0.2778
p.R442Q
SIDM00474
Ovarian Carcinoma
GDSC
PPIY
ITCH
0.2778
p.H450Y
TCGA-EO-A22R
UCEC
TCGA
PPIY
ITCH
0.25
p.H445L
DO7890
COAD
ICGC
PPIY
ITCH
0.7313
p.E442Q
DO35122
PACA
ICGC
PPIY
ITCH
0.2778
p.A443S
DO232663
PBCA
ICGC
PPIY
ITCH
0.3056
p.D437E
SIDM00845
Burkitt's Lymphoma
GDSC
PPIY
ITCH
0.1389
p.D437E
SIDM00224
Mesothelioma
GDSC
PPIY
ITCH
0.1389
p.D437E
ACH-000569
Lung Cancer
CCLE
PPIY
ITCH
0.1389
p.D437E
IST-MES1
pleura
COSMIC
PPIY
ITCH
0.1389
p.R442W
SIDM01146
Gastric Carcinoma
GDSC
PPIY
ITCH
0.2778
p.R442W
ACH-000932
Gastric Cancer
CCLE
PPIY
ITCH
0.2778
p.R442W
NCI-SNU-1
stomach
COSMIC
PPIY
ITCH
0.2778
p.P445L
SIDM01086
B-Lymphoblastic Leukemia
GDSC
PPIY
ITCH
0.7582
p.P445L
ACH-000874
Leukemia
CCLE
PPIY
ITCH
0.7582
p.P445L
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
PPIY
ITCH
0.7582
p.R439W
NCI-H1048
lung
COSMIC
PPIY
ITCH
0.1944
p.E442K
BT-474
breast
COSMIC
PPIY
ITCH
0.2778
Drug responses associated with ABLIM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPIY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14639
Actin-binding LIM protein 1
ITCH
525:528
PPIY
ITCH,NEDD4
0.9688
More...
O43281
Embryonal Fyn-associated substrate
ITCH
214:217
PPIY
ITCH,NEDD4
0.6414
More...
O94929
Actin-binding LIM protein 3
ITCH
444:447
PPIY
ITCH,NEDD4
0.9628
More...
Q08495
Dematin
ITCH
144:147
PPIY
ITCH,NEDD4
0.9997
More...
Q15303
Receptor tyrosine-protein kinase erbB-4
ITCH
1032:1035
PPIY
ITCH,NEDD4
0.9911
More...
Q5TC82
Roquin-1
ITCH
663:666
PPIY
ITCH,NEDD4
0.9994
More...
Q6H8Q1
Actin-binding LIM protein 2
ITCH
435:438
PPIY
ITCH,NEDD4
0.9984
More...
Q9NZR2
Low-density lipoprotein receptor-related protein 1B
ITCH
4538:4541
PPIY
ITCH,NEDD4
0.9665
More...
Q9Y2H6
Fibronectin type-III domain-containing protein 3A
ITCH
73:76
PPIY
ITCH,NEDD4
0.947
More...
Q6BDS2
UHRF1-binding protein 1
ITCH
1331:1334
PPIY
ITCH,NEDD4
0.9895
More...
Q9BRJ2
39S ribosomal protein L45, mitochondrial
ITCH
43:46
PPIY
ITCH,NEDD4
0.9042
More...
Q8IXT5
RNA-binding protein 12B
ITCH
516:519
PPIY
ITCH,NEDD4
0.9914
More...
A6NJJ6
UPF0575 protein C19orf67
ITCH
147:150
PPIY
ITCH,NEDD4
0.9135
More...
Q5VZQ5
Testis-expressed protein 36
ITCH
53:56
PPIY
ITCH,NEDD4
0.9983
More...