DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPIY
Uniprot ID:
Q6H8Q1
Source protein:
Actin-binding LIM protein 2
Source gene:
ABLIM2
Class:
ITCH
Location:
435:438
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9984
ASA_SCORE:
77.7
COIL:
0.8868
CONS_SCORE:
0.4767
DSS_SCORE:
0.6159
HELIX:
0.072
FCONS_SCORE:
1.1143
RIG_SCORE:
0.7452
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E425D
TCGA-AP-A1DK
UCEC
TCGA
PPIY
ITCH
0.5
p.D438N
TCGA-BT-A2LB
BLCA
TCGA
PPIY
ITCH
0.6932
p.D438H
TCGA-CN-5369
HNSC
TCGA
PPIY
ITCH
0.7688
p.P443S
TCGA-EB-A5FP
SKCM
TCGA
PPIY
ITCH
0.1944
p.P443S
TCGA-EE-A29D
SKCM
TCGA
PPIY
ITCH
0.1944
p.P443L
TCGA-EE-A29D
SKCM
TCGA
PPIY
ITCH
0.1944
p.V435M
TCGA-FI-A2D0
UCEC
TCGA
PPIY
ITCH
0.7208
p.V435A
TCGA-FI-A2D5
UCEC
TCGA
PPIY
ITCH
0.6936
p.D440N
DO234194
ESAD
ICGC
PPIY
ITCH
0.2778
p.G426D
DO20827
KIRP
ICGC
PPIY
ITCH
0.0833
p.T425S
DO228278
LICA
ICGC
PPIY
ITCH
0.5
p.R433G
DO231835
LINC
ICGC
PPIY
ITCH
0.2778
p.S436F
DO51962
PRAD
ICGC
PPIY
ITCH
0.7982
p.S436F
DO37814
SKCM
ICGC
PPIY
ITCH
0.7982
p.A442S
DO37831
SKCM
ICGC
PPIY
ITCH
0.2222
p.A442S
DO47578
SKCM
ICGC
PPIY
ITCH
0.2222
p.R433M
DO37444
SKCM
ICGC
PPIY
ITCH
0.2778
p.D429N
DO47623
SKCM
ICGC
PPIY
ITCH
0.1667
p.S443F
DO223907
SKCM
ICGC
PPIY
ITCH
0.1944
p.S443F
DO51281
SKCM
ICGC
PPIY
ITCH
0.1944
p.L426P
DO47901
STAD
ICGC
PPIY
ITCH
0.0833
p.R428W
SIDM00084
Glioblastoma
GDSC
PPIY
ITCH
0.25
p.R445Q
SNU-283
large_intestine
COSMIC
PPIY
ITCH
0.1389
p.P441L
Sarc9371
bone
COSMIC
PPIY
ITCH
0.25
p.T441I
C-33-A
cervix
COSMIC
PPIY
ITCH
0.25
p.T430I
C-33-A
cervix
COSMIC
PPIY
ITCH
0.1944
p.T440I
C-33-A
cervix
COSMIC
PPIY
ITCH
0.2778
p.T429I
C-33-A
cervix
COSMIC
PPIY
ITCH
0.1667
p.P444L
H3118
upper_aerodigestive_tract
COSMIC
PPIY
ITCH
0.1667
Drug responses associated with ABLIM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPIY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14639
Actin-binding LIM protein 1
ITCH
525:528
PPIY
ITCH,NEDD4
0.9688
More...
O43281
Embryonal Fyn-associated substrate
ITCH
214:217
PPIY
ITCH,NEDD4
0.6414
More...
O94929
Actin-binding LIM protein 3
ITCH
444:447
PPIY
ITCH,NEDD4
0.9628
More...
Q08495
Dematin
ITCH
144:147
PPIY
ITCH,NEDD4
0.9997
More...
Q15303
Receptor tyrosine-protein kinase erbB-4
ITCH
1032:1035
PPIY
ITCH,NEDD4
0.9911
More...
Q5TC82
Roquin-1
ITCH
663:666
PPIY
ITCH,NEDD4
0.9994
More...
Q6H8Q1
Actin-binding LIM protein 2
ITCH
435:438
PPIY
ITCH,NEDD4
0.9984
More...
Q9NZR2
Low-density lipoprotein receptor-related protein 1B
ITCH
4538:4541
PPIY
ITCH,NEDD4
0.9665
More...
Q9Y2H6
Fibronectin type-III domain-containing protein 3A
ITCH
73:76
PPIY
ITCH,NEDD4
0.947
More...
Q6BDS2
UHRF1-binding protein 1
ITCH
1331:1334
PPIY
ITCH,NEDD4
0.9895
More...
Q9BRJ2
39S ribosomal protein L45, mitochondrial
ITCH
43:46
PPIY
ITCH,NEDD4
0.9042
More...
Q8IXT5
RNA-binding protein 12B
ITCH
516:519
PPIY
ITCH,NEDD4
0.9914
More...
A6NJJ6
UPF0575 protein C19orf67
ITCH
147:150
PPIY
ITCH,NEDD4
0.9135
More...
Q5VZQ5
Testis-expressed protein 36
ITCH
53:56
PPIY
ITCH,NEDD4
0.9983
More...