DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPIY
Uniprot ID:
Q9Y2H6
Source protein:
Fibronectin type-III domain-containing protein 3A
Source gene:
FNDC3A
Class:
ITCH
Location:
73:76
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.947
ASA_SCORE:
85.775
COIL:
0.902
CONS_SCORE:
0.4074
DSS_SCORE:
0.3893
HELIX:
0.0183
FCONS_SCORE:
0.8552
RIG_SCORE:
0.7281
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V77L
TCGA-W5-AA34
CHOL
TCGA
PPIY
ITCH
0.3056
p.V72L
DO228974
LICA
ICGC
PPIY
ITCH
0.3056
p.P64L
DO46905
RECA
ICGC
PPIY
ITCH
0.0833
p.I75M
SIDM00636
Non-Cancerous
GDSC
PPIY
ITCH
0.6507
p.I75M
ACH-001533
Lymphoma
CCLE
PPIY
ITCH
0.6507
p.I75M
ACH-002270
Non-Cancerous
CCLE
PPIY
ITCH
0.6507
p.I75M
MC-CAR
haematopoietic_and_lymphoid_tissue
COSMIC
PPIY
ITCH
0.6507
Drug responses associated with FNDC3A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPIY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14639
Actin-binding LIM protein 1
ITCH
525:528
PPIY
ITCH,NEDD4
0.9688
More...
O43281
Embryonal Fyn-associated substrate
ITCH
214:217
PPIY
ITCH,NEDD4
0.6414
More...
O94929
Actin-binding LIM protein 3
ITCH
444:447
PPIY
ITCH,NEDD4
0.9628
More...
Q08495
Dematin
ITCH
144:147
PPIY
ITCH,NEDD4
0.9997
More...
Q15303
Receptor tyrosine-protein kinase erbB-4
ITCH
1032:1035
PPIY
ITCH,NEDD4
0.9911
More...
Q5TC82
Roquin-1
ITCH
663:666
PPIY
ITCH,NEDD4
0.9994
More...
Q6H8Q1
Actin-binding LIM protein 2
ITCH
435:438
PPIY
ITCH,NEDD4
0.9984
More...
Q9NZR2
Low-density lipoprotein receptor-related protein 1B
ITCH
4538:4541
PPIY
ITCH,NEDD4
0.9665
More...
Q9Y2H6
Fibronectin type-III domain-containing protein 3A
ITCH
73:76
PPIY
ITCH,NEDD4
0.947
More...
Q6BDS2
UHRF1-binding protein 1
ITCH
1331:1334
PPIY
ITCH,NEDD4
0.9895
More...
Q9BRJ2
39S ribosomal protein L45, mitochondrial
ITCH
43:46
PPIY
ITCH,NEDD4
0.9042
More...
Q8IXT5
RNA-binding protein 12B
ITCH
516:519
PPIY
ITCH,NEDD4
0.9914
More...
A6NJJ6
UPF0575 protein C19orf67
ITCH
147:150
PPIY
ITCH,NEDD4
0.9135
More...
Q5VZQ5
Testis-expressed protein 36
ITCH
53:56
PPIY
ITCH,NEDD4
0.9983
More...