DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPIY
Uniprot ID:
Q5VZQ5
Source protein:
Testis-expressed protein 36
Source gene:
TEX36
Class:
ITCH
Location:
53:56
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9983
ASA_SCORE:
72.225
COIL:
0.851
CONS_SCORE:
0.6991
DSS_SCORE:
0.5972
HELIX:
0.0778
FCONS_SCORE:
1.484
RIG_SCORE:
0.7422
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R46Q
TCGA-2W-A8YY
CESC
TCGA
PPIY
ITCH
0.1389
p.R46Q
TCGA-L5-A8NW
ESCA
TCGA
PPIY
ITCH
0.1389
p.R46Q
DO223732
CESC
ICGC
PPIY
ITCH
0.1389
p.L44V
DO234187
ESAD
ICGC
PPIY
ITCH
0.0833
p.Y56C
DO48222
ESCA
ICGC
PPIY
ITCH
0.7087
p.H43Q
DO229037
LICA
ICGC
PPIY
ITCH
0.0556
p.A48V
DO44862
LICA
ICGC
PPIY
ITCH
0.1944
p.A48V
SIDM00217
Colorectal Carcinoma
GDSC
PPIY
ITCH
0.1944
p.A48V
ACH-000999
Colon/Colorectal Cancer
CCLE
PPIY
ITCH
0.1944
p.A48V
SNU-1040
large_intestine
COSMIC
PPIY
ITCH
0.1944
p.R59W
DO32829
PACA
ICGC
PPIY
ITCH
0.25
Drug responses associated with TEX36 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPIY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14639
Actin-binding LIM protein 1
ITCH
525:528
PPIY
ITCH,NEDD4
0.9688
More...
O43281
Embryonal Fyn-associated substrate
ITCH
214:217
PPIY
ITCH,NEDD4
0.6414
More...
O94929
Actin-binding LIM protein 3
ITCH
444:447
PPIY
ITCH,NEDD4
0.9628
More...
Q08495
Dematin
ITCH
144:147
PPIY
ITCH,NEDD4
0.9997
More...
Q15303
Receptor tyrosine-protein kinase erbB-4
ITCH
1032:1035
PPIY
ITCH,NEDD4
0.9911
More...
Q5TC82
Roquin-1
ITCH
663:666
PPIY
ITCH,NEDD4
0.9994
More...
Q6H8Q1
Actin-binding LIM protein 2
ITCH
435:438
PPIY
ITCH,NEDD4
0.9984
More...
Q9NZR2
Low-density lipoprotein receptor-related protein 1B
ITCH
4538:4541
PPIY
ITCH,NEDD4
0.9665
More...
Q9Y2H6
Fibronectin type-III domain-containing protein 3A
ITCH
73:76
PPIY
ITCH,NEDD4
0.947
More...
Q6BDS2
UHRF1-binding protein 1
ITCH
1331:1334
PPIY
ITCH,NEDD4
0.9895
More...
Q9BRJ2
39S ribosomal protein L45, mitochondrial
ITCH
43:46
PPIY
ITCH,NEDD4
0.9042
More...
Q8IXT5
RNA-binding protein 12B
ITCH
516:519
PPIY
ITCH,NEDD4
0.9914
More...
A6NJJ6
UPF0575 protein C19orf67
ITCH
147:150
PPIY
ITCH,NEDD4
0.9135
More...
Q5VZQ5
Testis-expressed protein 36
ITCH
53:56
PPIY
ITCH,NEDD4
0.9983
More...