DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PRSTS
Uniprot ID:
P13646
Source protein:
Keratin, type I cytoskeletal 13
Source gene:
KRT13
Class:
DEG_SPOP_SBC_1
Location:
428:432
E3 ligase:
SPOP
DEGRON score:
0.917
ASA_SCORE:
103.9
COIL:
0.8832
CONS_SCORE:
0.8431
DSS_SCORE:
0.5483
HELIX:
0.0196
FCONS_SCORE:
1.005
RIG_SCORE:
0.6095
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G418D
TCGA-DM-A0XD
COAD
TCGA
PRSTS
DEG_SPOP_SBC_1
0.0556
p.G418D
DO10228
COAD
ICGC
PRSTS
DEG_SPOP_SBC_1
0.0556
p.S440F
TCGA-IG-A5S3
ESCA
TCGA
PRSTS
DEG_SPOP_SBC_1
0.1111
p.A423T
DO229036
LICA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.1944
p.A439D
DO229045
LICA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.1389
p.P420L
DO222868
MELA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.1111
p.S425N
DO232224
PBCA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.6944
p.V426I
SIDM01261
Breast Carcinoma
GDSC
PRSTS
DEG_SPOP_SBC_1
0.2778
p.V426I
SIDM00868
Non-Cancerous
GDSC
PRSTS
DEG_SPOP_SBC_1
0.2778
p.V426I
SIDM01049
Non-Cancerous
GDSC
PRSTS
DEG_SPOP_SBC_1
0.2778
p.S430N
SIDM00183
Small Cell Lung Carcinoma
GDSC
PRSTS
DEG_SPOP_SBC_1
0.7069
p.P420S
SIDM00930
Osteosarcoma
GDSC
PRSTS
DEG_SPOP_SBC_1
0.1111
p.P420S
ACH-001715
Bone Cancer
CCLE
PRSTS
DEG_SPOP_SBC_1
0.1111
p.P420S
CAL-72
bone
COSMIC
PRSTS
DEG_SPOP_SBC_1
0.1111
p.R429C
SIDM01629
Melanoma
GDSC
PRSTS
DEG_SPOP_SBC_1
0.719
Drug responses associated with KRT13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60673
DNA polymerase zeta catalytic subunit
DEG_SPOP_SBC_1
1856:1860
PRSTS
SPOP
0.6142
More...
P13646
Keratin, type I cytoskeletal 13
DEG_SPOP_SBC_1
428:432
PRSTS
SPOP
0.917
More...
P57054
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
DEG_SPOP_SBC_1
3:7
PRSTS
SPOP
0.6647
More...
Q5T200
Zinc finger CCCH domain-containing protein 13
DEG_SPOP_SBC_1
314:318
PRSTS
SPOP
0.9761
More...
Q5T8A7
Protein phosphatase 1 regulatory subunit 26
DEG_SPOP_SBC_1
939:943
PRSTS
SPOP
0.9127
More...
Q6ZU52
Uncharacterized protein KIAA0408
DEG_SPOP_SBC_1
270:274
PRSTS
SPOP
0.9827
More...
Q70EL4
Ubiquitin carboxyl-terminal hydrolase 43
DEG_SPOP_SBC_1
842:846
PRSTS
SPOP
0.9784
More...
Q9BYB0
SH3 and multiple ankyrin repeat domains protein 3
DEG_SPOP_SBC_1
798:802
PRSTS
SPOP
0.999
More...
Q9H792
Inactive tyrosine-protein kinase PEAK1
DEG_SPOP_SBC_1
873:877
PRSTS
SPOP
0.9983
More...
Q8IWB9
Testis-expressed protein 2
DEG_SPOP_SBC_1
1109:1113
PRSTS
SPOP
0.9954
More...
Q9P2F8
Signal-induced proliferation-associated 1-like protein 2
DEG_SPOP_SBC_1
1104:1108
PRSTS
SPOP
0.6375
More...
Q5BKX6
Solute carrier family 45 member 4
DEG_SPOP_SBC_1
344:348
PRSTS
SPOP
0.9894
More...