DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PRSTS
Uniprot ID:
Q70EL4
Source protein:
Ubiquitin carboxyl-terminal hydrolase 43
Source gene:
USP43
Class:
DEG_SPOP_SBC_1
Location:
842:846
E3 ligase:
SPOP
DEGRON score:
0.9784
ASA_SCORE:
92.26
COIL:
0.8786
CONS_SCORE:
0.2914
DSS_SCORE:
0.4272
HELIX:
0.088
FCONS_SCORE:
0.9976
RIG_SCORE:
0.6567
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V850A
TCGA-A5-A0G2
UCEC
TCGA
PRSTS
DEG_SPOP_SBC_1
0.2222
p.V850A
DO41235
UCEC
ICGC
PRSTS
DEG_SPOP_SBC_1
0.2222
p.T854A
TCGA-AP-A1DV
UCEC
TCGA
PRSTS
DEG_SPOP_SBC_1
0.1111
p.T854A
DO43186
UCEC
ICGC
PRSTS
DEG_SPOP_SBC_1
0.1111
p.R840Q
TCGA-AX-A05Z
UCEC
TCGA
PRSTS
DEG_SPOP_SBC_1
0.2778
p.R840Q
DO40884
UCEC
ICGC
PRSTS
DEG_SPOP_SBC_1
0.2778
p.S851L
TCGA-EB-A3XD
SKCM
TCGA
PRSTS
DEG_SPOP_SBC_1
0.1944
p.S851L
DO228138
PBCA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.1944
p.S851L
DO37871
SKCM
ICGC
PRSTS
DEG_SPOP_SBC_1
0.1944
p.T854M
DO233709
GACA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.1111
p.L836F
DO228952
LICA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.1667
p.LV832LM
DO222363
MELA
ICGC
PRSTS
DEG_SPOP_SBC_1
0
p.P842L
DO222880
MELA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.7582
p.Q847H
DO50690
ORCA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.3056
p.R841I
SIDM01611
Endometrial Carcinoma
GDSC
PRSTS
DEG_SPOP_SBC_1
0.3056
p.R841I
ACH-000996
Endometrial/Uterine Cancer
CCLE
PRSTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with USP43 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60673
DNA polymerase zeta catalytic subunit
DEG_SPOP_SBC_1
1856:1860
PRSTS
SPOP
0.6142
More...
P13646
Keratin, type I cytoskeletal 13
DEG_SPOP_SBC_1
428:432
PRSTS
SPOP
0.917
More...
P57054
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
DEG_SPOP_SBC_1
3:7
PRSTS
SPOP
0.6647
More...
Q5T200
Zinc finger CCCH domain-containing protein 13
DEG_SPOP_SBC_1
314:318
PRSTS
SPOP
0.9761
More...
Q5T8A7
Protein phosphatase 1 regulatory subunit 26
DEG_SPOP_SBC_1
939:943
PRSTS
SPOP
0.9127
More...
Q6ZU52
Uncharacterized protein KIAA0408
DEG_SPOP_SBC_1
270:274
PRSTS
SPOP
0.9827
More...
Q70EL4
Ubiquitin carboxyl-terminal hydrolase 43
DEG_SPOP_SBC_1
842:846
PRSTS
SPOP
0.9784
More...
Q9BYB0
SH3 and multiple ankyrin repeat domains protein 3
DEG_SPOP_SBC_1
798:802
PRSTS
SPOP
0.999
More...
Q9H792
Inactive tyrosine-protein kinase PEAK1
DEG_SPOP_SBC_1
873:877
PRSTS
SPOP
0.9983
More...
Q8IWB9
Testis-expressed protein 2
DEG_SPOP_SBC_1
1109:1113
PRSTS
SPOP
0.9954
More...
Q9P2F8
Signal-induced proliferation-associated 1-like protein 2
DEG_SPOP_SBC_1
1104:1108
PRSTS
SPOP
0.6375
More...
Q5BKX6
Solute carrier family 45 member 4
DEG_SPOP_SBC_1
344:348
PRSTS
SPOP
0.9894
More...