DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PRSTS
Uniprot ID:
Q6ZU52
Source protein:
Uncharacterized protein KIAA0408
Source gene:
KIAA0408
Class:
DEG_SPOP_SBC_1
Location:
270:274
E3 ligase:
SPOP
DEGRON score:
0.9827
ASA_SCORE:
85.54
COIL:
0.892
CONS_SCORE:
0.8672
DSS_SCORE:
0.7576
HELIX:
0.0672
FCONS_SCORE:
1.5961
RIG_SCORE:
0.5894
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R275Q
TCGA-AG-A002
READ
TCGA
PRSTS
DEG_SPOP_SBC_1
0.3056
p.R275Q
TCGA-EI-6917
READ
TCGA
PRSTS
DEG_SPOP_SBC_1
0.3056
p.R275Q
DO222363
MELA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.3056
p.R275Q
DO36881
READ
ICGC
PRSTS
DEG_SPOP_SBC_1
0.3056
p.R275Q
ACH-000626
Myeloma
CCLE
PRSTS
DEG_SPOP_SBC_1
0.3056
p.R275Q
U-266
haematopoietic_and_lymphoid_tissue
COSMIC
PRSTS
DEG_SPOP_SBC_1
0.3056
p.R275Q
MEG-01
haematopoietic_and_lymphoid_tissue
COSMIC
PRSTS
DEG_SPOP_SBC_1
0.3056
p.P265S
TCGA-AG-A002
READ
TCGA
PRSTS
DEG_SPOP_SBC_1
0.1944
p.R271I
TCGA-B5-A0JY
UCEC
TCGA
PRSTS
DEG_SPOP_SBC_1
0.6991
p.R271I
DO43041
UCEC
ICGC
PRSTS
DEG_SPOP_SBC_1
0.6991
p.S280L
TCGA-EE-A182
SKCM
TCGA
PRSTS
DEG_SPOP_SBC_1
0.1667
p.S280L
DO37814
SKCM
ICGC
PRSTS
DEG_SPOP_SBC_1
0.1667
p.E283K
DO234230
ESAD
ICGC
PRSTS
DEG_SPOP_SBC_1
0.0833
p.P266Q
DO229032
LICA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.2222
p.N262D
DO222415
MELA
ICGC
PRSTS
DEG_SPOP_SBC_1
0.1111
p.F277C
DO36556
READ
ICGC
PRSTS
DEG_SPOP_SBC_1
0.25
p.R261K
SIDM00545
Melanoma
GDSC
PRSTS
DEG_SPOP_SBC_1
0.0833
p.R261K
ACH-000987
Skin Cancer
CCLE
PRSTS
DEG_SPOP_SBC_1
0.0833
p.R261K
Mewo
skin
COSMIC
PRSTS
DEG_SPOP_SBC_1
0.0833
p.P278S
SIDM00779
Colorectal Carcinoma
GDSC
PRSTS
DEG_SPOP_SBC_1
0.2222
p.P278S
SIDM01188
Pancreatic Carcinoma
GDSC
PRSTS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with KIAA0408 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60673
DNA polymerase zeta catalytic subunit
DEG_SPOP_SBC_1
1856:1860
PRSTS
SPOP
0.6142
More...
P13646
Keratin, type I cytoskeletal 13
DEG_SPOP_SBC_1
428:432
PRSTS
SPOP
0.917
More...
P57054
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
DEG_SPOP_SBC_1
3:7
PRSTS
SPOP
0.6647
More...
Q5T200
Zinc finger CCCH domain-containing protein 13
DEG_SPOP_SBC_1
314:318
PRSTS
SPOP
0.9761
More...
Q5T8A7
Protein phosphatase 1 regulatory subunit 26
DEG_SPOP_SBC_1
939:943
PRSTS
SPOP
0.9127
More...
Q6ZU52
Uncharacterized protein KIAA0408
DEG_SPOP_SBC_1
270:274
PRSTS
SPOP
0.9827
More...
Q70EL4
Ubiquitin carboxyl-terminal hydrolase 43
DEG_SPOP_SBC_1
842:846
PRSTS
SPOP
0.9784
More...
Q9BYB0
SH3 and multiple ankyrin repeat domains protein 3
DEG_SPOP_SBC_1
798:802
PRSTS
SPOP
0.999
More...
Q9H792
Inactive tyrosine-protein kinase PEAK1
DEG_SPOP_SBC_1
873:877
PRSTS
SPOP
0.9983
More...
Q8IWB9
Testis-expressed protein 2
DEG_SPOP_SBC_1
1109:1113
PRSTS
SPOP
0.9954
More...
Q9P2F8
Signal-induced proliferation-associated 1-like protein 2
DEG_SPOP_SBC_1
1104:1108
PRSTS
SPOP
0.6375
More...
Q5BKX6
Solute carrier family 45 member 4
DEG_SPOP_SBC_1
344:348
PRSTS
SPOP
0.9894
More...