DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTTTS
Uniprot ID:
Q9H987
Source protein:
Synaptopodin 2-like protein
Source gene:
SYNPO2L
Class:
DEG_SPOP_SBC_1
Location:
480:484
E3 ligase:
SPOP
DEGRON score:
0.9703
ASA_SCORE:
84.6
COIL:
0.932
CONS_SCORE:
0.5624
DSS_SCORE:
0.6182
HELIX:
0.0162
FCONS_SCORE:
0.9316
RIG_SCORE:
0.7288
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V485I
TCGA-EE-A2GR
SKCM
TCGA
PTTTS
DEG_SPOP_SBC_1
0.3056
p.V485I
DO37996
SKCM
ICGC
PTTTS
DEG_SPOP_SBC_1
0.3056
p.P473L
TCGA-EO-A22U
UCEC
TCGA
PTTTS
DEG_SPOP_SBC_1
0.1389
p.P473L
DO43755
UCEC
ICGC
PTTTS
DEG_SPOP_SBC_1
0.1389
p.P473S
DO222864
COCA
ICGC
PTTTS
DEG_SPOP_SBC_1
0.1389
p.R479Q
DO233622
GACA
ICGC
PTTTS
DEG_SPOP_SBC_1
0.3056
p.G474C
DO17178
KIRC
ICGC
PTTTS
DEG_SPOP_SBC_1
0.1667
p.R488Q
DO35083
PACA
ICGC
PTTTS
DEG_SPOP_SBC_1
0.2222
p.A486T
SK-UT-1
soft_tissue
COSMIC
PTTTS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with SYNPO2L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1A4S6
Rho GTPase-activating protein 10
DEG_SPOP_SBC_1
693:697
PTTTS
SPOP
0.9308
More...
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
738:742
PTTTS
SPOP
0.9721
More...
P34810
Macrosialin
DEG_SPOP_SBC_1
81:85
PTTTS
SPOP
0.9583
More...
Q6ZSS7
Major facilitator superfamily domain-containing protein 6
DEG_SPOP_SBC_1
424:428
PTTTS
SPOP
0.5073
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
197:201
PTTTS
SPOP
0.9976
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
761:765
PTTTS
SPOP
0.9806
More...
Q9H987
Synaptopodin 2-like protein
DEG_SPOP_SBC_1
480:484
PTTTS
SPOP
0.9703
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
883:887
PTTTS
SPOP
0.9896
More...
Q9UBP5
Hairy/enhancer-of-split related with YRPW motif protein 2
DEG_SPOP_SBC_1
40:44
PTTTS
SPOP
0.8075
More...
Q9Y4F4
TOG array regulator of axonemal microtubules protein 1
DEG_SPOP_SBC_1
61:65
PTTTS
SPOP
0.9973
More...
Q9Y618
Nuclear receptor corepressor 2
DEG_SPOP_SBC_1
1788:1792
PTTTS
SPOP
0.9962
More...
Q5T0B9
Zinc finger protein 362
DEG_SPOP_SBC_1
148:152
PTTTS
SPOP
0.9988
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
345:349
PTTTS
SPOP
0.9532
More...
Q5T0Z8
Uncharacterized protein C6orf132
DEG_SPOP_SBC_1
699:703
PTTTS
SPOP
0.9973
More...