DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTTTS
Uniprot ID:
Q9Y618
Source protein:
Nuclear receptor corepressor 2
Source gene:
NCOR2
Class:
DEG_SPOP_SBC_1
Location:
1788:1792
E3 ligase:
SPOP
DEGRON score:
0.9962
ASA_SCORE:
99.8
COIL:
0.971
CONS_SCORE:
0.3615
DSS_SCORE:
0.8299
HELIX:
0.0198
FCONS_SCORE:
1.1195
RIG_SCORE:
0.5673
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1787Q
TCGA-19-5956
GBM
TCGA
PTTTS
DEG_SPOP_SBC_1
0.3056
p.L1785F
TCGA-75-5126
LUAD
TCGA
PTTTS
DEG_SPOP_SBC_1
0.25
p.S1792F
TCGA-CC-A3MA
LIHC
TCGA
PTTTS
DEG_SPOP_SBC_1
0.7982
p.S1794F
TCGA-EE-A182
SKCM
TCGA
PTTTS
DEG_SPOP_SBC_1
0.7222
p.S1794F
TCGA-FW-A3TU
SKCM
TCGA
PTTTS
DEG_SPOP_SBC_1
0.7222
p.E1799D
DO2020
BRCA
ICGC
PTTTS
DEG_SPOP_SBC_1
0.1389
p.R1798W
DO44615
LGG
ICGC
PTTTS
DEG_SPOP_SBC_1
0.1667
p.S1782F
DO23058
LIHC
ICGC
PTTTS
DEG_SPOP_SBC_1
0.1667
p.D1797E
DO52671
MALY
ICGC
PTTTS
DEG_SPOP_SBC_1
0.1944
p.E1785K
DO222868
MELA
ICGC
PTTTS
DEG_SPOP_SBC_1
0.25
p.R1796L
DO47665
SKCM
ICGC
PTTTS
DEG_SPOP_SBC_1
0.2222
p.R1796W
DO41584
UCEC
ICGC
PTTTS
DEG_SPOP_SBC_1
0.2222
p.Y1791H
SNU-C5
large_intestine
COSMIC
PTTTS
DEG_SPOP_SBC_1
0.7229
p.R1794W
KMS-11
haematopoietic_and_lymphoid_tissue
COSMIC
PTTTS
DEG_SPOP_SBC_1
0.7222
p.R1794W
GOTO
autonomic_ganglia
COSMIC
PTTTS
DEG_SPOP_SBC_1
0.7222
p.R1783Q
CAL-39
vulva
COSMIC
PTTTS
DEG_SPOP_SBC_1
0.6389
p.R1800Q
CAL-39
vulva
COSMIC
PTTTS
DEG_SPOP_SBC_1
0.1111
p.S1800I
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PTTTS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with NCOR2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1A4S6
Rho GTPase-activating protein 10
DEG_SPOP_SBC_1
693:697
PTTTS
SPOP
0.9308
More...
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
738:742
PTTTS
SPOP
0.9721
More...
P34810
Macrosialin
DEG_SPOP_SBC_1
81:85
PTTTS
SPOP
0.9583
More...
Q6ZSS7
Major facilitator superfamily domain-containing protein 6
DEG_SPOP_SBC_1
424:428
PTTTS
SPOP
0.5073
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
197:201
PTTTS
SPOP
0.9976
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
761:765
PTTTS
SPOP
0.9806
More...
Q9H987
Synaptopodin 2-like protein
DEG_SPOP_SBC_1
480:484
PTTTS
SPOP
0.9703
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
883:887
PTTTS
SPOP
0.9896
More...
Q9UBP5
Hairy/enhancer-of-split related with YRPW motif protein 2
DEG_SPOP_SBC_1
40:44
PTTTS
SPOP
0.8075
More...
Q9Y4F4
TOG array regulator of axonemal microtubules protein 1
DEG_SPOP_SBC_1
61:65
PTTTS
SPOP
0.9973
More...
Q9Y618
Nuclear receptor corepressor 2
DEG_SPOP_SBC_1
1788:1792
PTTTS
SPOP
0.9962
More...
Q5T0B9
Zinc finger protein 362
DEG_SPOP_SBC_1
148:152
PTTTS
SPOP
0.9988
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
345:349
PTTTS
SPOP
0.9532
More...
Q5T0Z8
Uncharacterized protein C6orf132
DEG_SPOP_SBC_1
699:703
PTTTS
SPOP
0.9973
More...