DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATSS
Uniprot ID:
O94991
Source protein:
SLIT and NTRK-like protein 5
Source gene:
SLITRK5
Class:
DEG_SPOP_SBC_1
Location:
316:320
E3 ligase:
SPOP
DEGRON score:
0.5471
ASA_SCORE:
44.74
COIL:
0.7044
CONS_SCORE:
0.5142
DSS_SCORE:
0.5353
HELIX:
0.0556
FCONS_SCORE:
0.901
RIG_SCORE:
0.657
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P310Q
TCGA-43-2576
LUSC
TCGA
VATSS
DEG_SPOP_SBC_1
0.1667
p.T308N
TCGA-44-3918
LUAD
TCGA
VATSS
DEG_SPOP_SBC_1
0.1111
p.P310L
TCGA-D1-A167
UCEC
TCGA
VATSS
DEG_SPOP_SBC_1
0.1667
p.P310L
SIDM01560
Rhabdomyosarcoma
GDSC
VATSS
DEG_SPOP_SBC_1
0.1667
p.S319Y
TCGA-EO-A22U
UCEC
TCGA
VATSS
DEG_SPOP_SBC_1
0.712
p.L306S
TCGA-EY-A214
UCEC
TCGA
VATSS
DEG_SPOP_SBC_1
0.0556
p.T318S
TCGA-MN-A4N4
LUAD
TCGA
VATSS
DEG_SPOP_SBC_1
0.6005
p.H307Y
TCGA-VS-A8EC
CESC
TCGA
VATSS
DEG_SPOP_SBC_1
0.0833
p.H307Y
SIDM00451
T-Lymphoblastic Leukemia
GDSC
VATSS
DEG_SPOP_SBC_1
0.0833
p.H307Y
ACH-000937
Leukemia
CCLE
VATSS
DEG_SPOP_SBC_1
0.0833
p.H307Y
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
VATSS
DEG_SPOP_SBC_1
0.0833
p.D309E
DO233178
GACA
ICGC
VATSS
DEG_SPOP_SBC_1
0.1389
p.C326S
DO25058
LUAD
ICGC
VATSS
DEG_SPOP_SBC_1
0.1667
p.D318N
DO36556
READ
ICGC
VATSS
DEG_SPOP_SBC_1
0.6932
p.P323H
DO41361
UCEC
ICGC
VATSS
DEG_SPOP_SBC_1
0.25
p.S320F
SIDM01175
Other Sarcomas
GDSC
VATSS
DEG_SPOP_SBC_1
0.7982
p.S320F
ACH-002309
Sarcoma
CCLE
VATSS
DEG_SPOP_SBC_1
0.7982
p.S320F
SW684
soft_tissue
COSMIC
VATSS
DEG_SPOP_SBC_1
0.7982
p.T308I
SIDM00453
Pancreatic Carcinoma
GDSC
VATSS
DEG_SPOP_SBC_1
0.1111
p.T308I
ACH-000023
Pancreatic Cancer
CCLE
VATSS
DEG_SPOP_SBC_1
0.1111
p.T308I
PA-TU-8988T
pancreas
COSMIC
VATSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with SLITRK5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94991
SLIT and NTRK-like protein 5
DEG_SPOP_SBC_1
316:320
VATSS
SPOP
0.5471
More...
P13611
Versican core protein
DEG_SPOP_SBC_1
1761:1765
VATSS
SPOP
0.9537
More...
P46821
Microtubule-associated protein 1B
DEG_SPOP_SBC_1
1557:1561
VATSS
SPOP
0.8877
More...
P49750
YLP motif-containing protein 1
DEG_SPOP_SBC_1
971:975
VATSS
SPOP
0.9823
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
921:925
VATSS
SPOP
0.9219
More...
Q96CT7
Coiled-coil domain-containing protein 124
DEG_SPOP_SBC_1
89:93
VATSS
SPOP
0.9938
More...
Q9H1A4
Anaphase-promoting complex subunit 1
DEG_SPOP_SBC_1
295:299
VATSS
SPOP
0.8406
More...
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_SPOP_SBC_1
1484:1488
VATSS
SPOP
0.8289
More...
O43638
Forkhead box protein S1
DEG_SPOP_SBC_1
208:212
VATSS
SPOP
0.8893
More...
O75363
Breast carcinoma-amplified sequence 1
DEG_SPOP_SBC_1
59:63
VATSS
SPOP
0.9947
More...
Q96KR1
Zinc finger RNA-binding protein
DEG_SPOP_SBC_1
461:465
VATSS
SPOP
0.9974
More...
Q6UX68
XK-related protein 5
DEG_SPOP_SBC_1
550:554
VATSS
SPOP
0.9819
More...
Q9BTE0
Alpha/beta-tubulin-N-acetyltransferase 9
DEG_SPOP_SBC_1
164:168
VATSS
SPOP
0.7158
More...