DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATSS
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
DEG_SPOP_SBC_1
Location:
1761:1765
E3 ligase:
SPOP
DEGRON score:
0.9537
ASA_SCORE:
77.34
COIL:
0.775
CONS_SCORE:
0.3935
DSS_SCORE:
0.5489
HELIX:
0.023
FCONS_SCORE:
0.9295
RIG_SCORE:
0.6441
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1767T
TCGA-14-1458
GBM
TCGA
VATSS
DEG_SPOP_SBC_1
0.2778
p.S1767T
DO13851
GBM
ICGC
VATSS
DEG_SPOP_SBC_1
0.2778
p.F1754I
TCGA-17-Z022
LUAD
TCGA
VATSS
DEG_SPOP_SBC_1
0.1389
p.T1763A
TCGA-AA-A010
COAD
TCGA
VATSS
DEG_SPOP_SBC_1
0.7139
p.D1766E
TCGA-DU-6392
LGG
TCGA
VATSS
DEG_SPOP_SBC_1
0.3056
p.D1766E
DO22237
LGG
ICGC
VATSS
DEG_SPOP_SBC_1
0.3056
p.F1773V
TCGA-F5-6814
READ
TCGA
VATSS
DEG_SPOP_SBC_1
0.1111
p.F1773V
DO36556
READ
ICGC
VATSS
DEG_SPOP_SBC_1
0.1111
p.P1753S
TCGA-GF-A6C9
SKCM
TCGA
VATSS
DEG_SPOP_SBC_1
0.1111
p.P1753S
DO51254
SKCM
ICGC
VATSS
DEG_SPOP_SBC_1
0.1111
p.A1762S
DO228971
LICA
ICGC
VATSS
DEG_SPOP_SBC_1
0.6477
p.F1773C
DO220857
MELA
ICGC
VATSS
DEG_SPOP_SBC_1
0.1111
p.F1773S
SIDM01007
T-Lymphoblastic Leukemia
GDSC
VATSS
DEG_SPOP_SBC_1
0.1111
p.F1773S
ACH-002256
Leukemia
CCLE
VATSS
DEG_SPOP_SBC_1
0.1111
p.F1773S
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VATSS
DEG_SPOP_SBC_1
0.1111
p.S1758G
SIDM00564
Ovarian Carcinoma
GDSC
VATSS
DEG_SPOP_SBC_1
0.25
p.S1758G
ACH-000527
Ovarian Cancer
CCLE
VATSS
DEG_SPOP_SBC_1
0.25
p.S1758G
OVISE
ovary
COSMIC
VATSS
DEG_SPOP_SBC_1
0.25
p.G1768D
SIDM00836
Colorectal Carcinoma
GDSC
VATSS
DEG_SPOP_SBC_1
0.25
p.G1768D
ACH-000820
Colon/Colorectal Cancer
CCLE
VATSS
DEG_SPOP_SBC_1
0.25
p.G1768D
SW403
large_intestine
COSMIC
VATSS
DEG_SPOP_SBC_1
0.25
p.I1751M
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
VATSS
DEG_SPOP_SBC_1
0.0556
p.A1770T
NCI-H1155
lung
COSMIC
VATSS
DEG_SPOP_SBC_1
0.1944
p.E1758K
HT-1376
urinary_tract
COSMIC
VATSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94991
SLIT and NTRK-like protein 5
DEG_SPOP_SBC_1
316:320
VATSS
SPOP
0.5471
More...
P13611
Versican core protein
DEG_SPOP_SBC_1
1761:1765
VATSS
SPOP
0.9537
More...
P46821
Microtubule-associated protein 1B
DEG_SPOP_SBC_1
1557:1561
VATSS
SPOP
0.8877
More...
P49750
YLP motif-containing protein 1
DEG_SPOP_SBC_1
971:975
VATSS
SPOP
0.9823
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
921:925
VATSS
SPOP
0.9219
More...
Q96CT7
Coiled-coil domain-containing protein 124
DEG_SPOP_SBC_1
89:93
VATSS
SPOP
0.9938
More...
Q9H1A4
Anaphase-promoting complex subunit 1
DEG_SPOP_SBC_1
295:299
VATSS
SPOP
0.8406
More...
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_SPOP_SBC_1
1484:1488
VATSS
SPOP
0.8289
More...
O43638
Forkhead box protein S1
DEG_SPOP_SBC_1
208:212
VATSS
SPOP
0.8893
More...
O75363
Breast carcinoma-amplified sequence 1
DEG_SPOP_SBC_1
59:63
VATSS
SPOP
0.9947
More...
Q96KR1
Zinc finger RNA-binding protein
DEG_SPOP_SBC_1
461:465
VATSS
SPOP
0.9974
More...
Q6UX68
XK-related protein 5
DEG_SPOP_SBC_1
550:554
VATSS
SPOP
0.9819
More...
Q9BTE0
Alpha/beta-tubulin-N-acetyltransferase 9
DEG_SPOP_SBC_1
164:168
VATSS
SPOP
0.7158
More...