DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VATSS
Uniprot ID:
Q96CT7
Source protein:
Coiled-coil domain-containing protein 124
Source gene:
CCDC124
Class:
DEG_SPOP_SBC_1
Location:
89:93
E3 ligase:
SPOP
DEGRON score:
0.9938
ASA_SCORE:
79
COIL:
0.873
CONS_SCORE:
0.3545
DSS_SCORE:
0.6073
HELIX:
0.0934
FCONS_SCORE:
0.8494
RIG_SCORE:
0.6745
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E101A
TCGA-AX-A1C4
UCEC
TCGA
VATSS
DEG_SPOP_SBC_1
0.1111
p.E101A
DO42480
UCEC
ICGC
VATSS
DEG_SPOP_SBC_1
0.1111
p.R97W
TCGA-AX-A2HD
UCEC
TCGA
VATSS
DEG_SPOP_SBC_1
0.2222
p.R97W
DO42608
UCEC
ICGC
VATSS
DEG_SPOP_SBC_1
0.2222
p.R97W
ACH-000974
Endometrial/Uterine Cancer
CCLE
VATSS
DEG_SPOP_SBC_1
0.2222
p.R97W
ACH-002026
Endometrial/Uterine Cancer
CCLE
VATSS
DEG_SPOP_SBC_1
0.2222
p.T91M
TCGA-L5-A4OH
ESCA
TCGA
VATSS
DEG_SPOP_SBC_1
0.7423
p.R88L
DO228985
LICA
ICGC
VATSS
DEG_SPOP_SBC_1
0.3056
p.D102N
DO222904
MELA
ICGC
VATSS
DEG_SPOP_SBC_1
0.0833
p.V95A
DO228138
PBCA
ICGC
VATSS
DEG_SPOP_SBC_1
0.2778
p.A86V
DO232761
PBCA
ICGC
VATSS
DEG_SPOP_SBC_1
0.25
p.D102V
ACH-000844
Lung Cancer
CCLE
VATSS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with CCDC124 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94991
SLIT and NTRK-like protein 5
DEG_SPOP_SBC_1
316:320
VATSS
SPOP
0.5471
More...
P13611
Versican core protein
DEG_SPOP_SBC_1
1761:1765
VATSS
SPOP
0.9537
More...
P46821
Microtubule-associated protein 1B
DEG_SPOP_SBC_1
1557:1561
VATSS
SPOP
0.8877
More...
P49750
YLP motif-containing protein 1
DEG_SPOP_SBC_1
971:975
VATSS
SPOP
0.9823
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
921:925
VATSS
SPOP
0.9219
More...
Q96CT7
Coiled-coil domain-containing protein 124
DEG_SPOP_SBC_1
89:93
VATSS
SPOP
0.9938
More...
Q9H1A4
Anaphase-promoting complex subunit 1
DEG_SPOP_SBC_1
295:299
VATSS
SPOP
0.8406
More...
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_SPOP_SBC_1
1484:1488
VATSS
SPOP
0.8289
More...
O43638
Forkhead box protein S1
DEG_SPOP_SBC_1
208:212
VATSS
SPOP
0.8893
More...
O75363
Breast carcinoma-amplified sequence 1
DEG_SPOP_SBC_1
59:63
VATSS
SPOP
0.9947
More...
Q96KR1
Zinc finger RNA-binding protein
DEG_SPOP_SBC_1
461:465
VATSS
SPOP
0.9974
More...
Q6UX68
XK-related protein 5
DEG_SPOP_SBC_1
550:554
VATSS
SPOP
0.9819
More...
Q9BTE0
Alpha/beta-tubulin-N-acetyltransferase 9
DEG_SPOP_SBC_1
164:168
VATSS
SPOP
0.7158
More...