DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATSS
Uniprot ID:
Q6UX68
Source protein:
XK-related protein 5
Source gene:
XKR5
Class:
DEG_SPOP_SBC_1
Location:
550:554
E3 ligase:
SPOP
DEGRON score:
0.9819
ASA_SCORE:
59.54
COIL:
0.7804
CONS_SCORE:
0.3311
DSS_SCORE:
0.5708
HELIX:
0.0846
FCONS_SCORE:
0.8868
RIG_SCORE:
0.6908
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A546T
SIDM00142
Endometrial Carcinoma
GDSC
VATSS
DEG_SPOP_SBC_1
0.2222
p.A546T
SIDM00534
Colorectal Carcinoma
GDSC
VATSS
DEG_SPOP_SBC_1
0.2222
p.A546T
COLO-684
endometrium
COSMIC
VATSS
DEG_SPOP_SBC_1
0.2222
p.A546T
HT-115
large_intestine
COSMIC
VATSS
DEG_SPOP_SBC_1
0.2222
p.Q555E
SIDM00749
Non-Small Cell Lung Carcinoma
GDSC
VATSS
DEG_SPOP_SBC_1
0.3056
p.Q555E
NCI-H1573
lung
COSMIC
VATSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with XKR5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94991
SLIT and NTRK-like protein 5
DEG_SPOP_SBC_1
316:320
VATSS
SPOP
0.5471
More...
P13611
Versican core protein
DEG_SPOP_SBC_1
1761:1765
VATSS
SPOP
0.9537
More...
P46821
Microtubule-associated protein 1B
DEG_SPOP_SBC_1
1557:1561
VATSS
SPOP
0.8877
More...
P49750
YLP motif-containing protein 1
DEG_SPOP_SBC_1
971:975
VATSS
SPOP
0.9823
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
921:925
VATSS
SPOP
0.9219
More...
Q96CT7
Coiled-coil domain-containing protein 124
DEG_SPOP_SBC_1
89:93
VATSS
SPOP
0.9938
More...
Q9H1A4
Anaphase-promoting complex subunit 1
DEG_SPOP_SBC_1
295:299
VATSS
SPOP
0.8406
More...
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_SPOP_SBC_1
1484:1488
VATSS
SPOP
0.8289
More...
O43638
Forkhead box protein S1
DEG_SPOP_SBC_1
208:212
VATSS
SPOP
0.8893
More...
O75363
Breast carcinoma-amplified sequence 1
DEG_SPOP_SBC_1
59:63
VATSS
SPOP
0.9947
More...
Q96KR1
Zinc finger RNA-binding protein
DEG_SPOP_SBC_1
461:465
VATSS
SPOP
0.9974
More...
Q6UX68
XK-related protein 5
DEG_SPOP_SBC_1
550:554
VATSS
SPOP
0.9819
More...
Q9BTE0
Alpha/beta-tubulin-N-acetyltransferase 9
DEG_SPOP_SBC_1
164:168
VATSS
SPOP
0.7158
More...