DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VSTSS
Uniprot ID:
P35716
Source protein:
Transcription factor SOX-11
Source gene:
SOX11
Class:
DEG_SPOP_SBC_1
Location:
339:343
E3 ligase:
SPOP
DEGRON score:
0.9784
ASA_SCORE:
95.88
COIL:
0.9802
CONS_SCORE:
0.5962
DSS_SCORE:
0.5878
HELIX:
0.009
FCONS_SCORE:
0.9504
RIG_SCORE:
0.5103
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A330T
TCGA-56-7823
LUSC
TCGA
VSTSS
DEG_SPOP_SBC_1
0.0833
p.A330T
DO223721
LUSC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.0833
p.V339M
TCGA-DD-AACI
LIHC
TCGA
VSTSS
DEG_SPOP_SBC_1
0.7208
p.V339M
DO52205
LIHC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.7208
p.V339M
DO229268
THCA
ICGC
VSTSS
DEG_SPOP_SBC_1
0.7208
p.S335T
TCGA-VB-A8QN
DLBC
TCGA
VSTSS
DEG_SPOP_SBC_1
0.2222
p.S335T
DO223730
DLBC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.2222
p.S347G
DO7990
COAD
ICGC
VSTSS
DEG_SPOP_SBC_1
0.2222
p.S344F
DO222762
COCA
ICGC
VSTSS
DEG_SPOP_SBC_1
0.3056
p.S344F
DO222662
MELA
ICGC
VSTSS
DEG_SPOP_SBC_1
0.3056
p.S349T
DO223022
ESCA
ICGC
VSTSS
DEG_SPOP_SBC_1
0.1667
p.S349G
SIDM02041
Colorectal Carcinoma
GDSC
VSTSS
DEG_SPOP_SBC_1
0.1667
p.S342P
SIDM00282
Colorectal Carcinoma
GDSC
VSTSS
DEG_SPOP_SBC_1
0.6752
p.S342P
ACH-000998
Colon/Colorectal Cancer
CCLE
VSTSS
DEG_SPOP_SBC_1
0.6752
p.S340T
SIDM00537
Colorectal Carcinoma
GDSC
VSTSS
DEG_SPOP_SBC_1
0.6005
p.S340T
ACH-000982
Colon/Colorectal Cancer
CCLE
VSTSS
DEG_SPOP_SBC_1
0.6005
p.S340T
ACH-001345
Colon/Colorectal Cancer
CCLE
VSTSS
DEG_SPOP_SBC_1
0.6005
Drug responses associated with SOX11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35716
Transcription factor SOX-11
DEG_SPOP_SBC_1
339:343
VSTSS
SPOP
0.9784
More...
P42684
Tyrosine-protein kinase ABL2
DEG_SPOP_SBC_1
816:820
VSTSS
SPOP
0.9961
More...
P54259
Atrophin-1
DEG_SPOP_SBC_1
38:42
VSTSS
SPOP
0.9947
More...
P57768
Sorting nexin-16
DEG_SPOP_SBC_1
33:37
VSTSS
SPOP
0.9979
More...
Q14149
MORC family CW-type zinc finger protein 3
DEG_SPOP_SBC_1
872:876
VSTSS
SPOP
0.9439
More...
Q68DE3
Basic helix-loop-helix domain-containing protein USF3
DEG_SPOP_SBC_1
776:780
VSTSS
SPOP
0.6894
More...
Q6PJT7
Zinc finger CCCH domain-containing protein 14
DEG_SPOP_SBC_1
131:135
VSTSS
SPOP
0.9971
More...
Q76L83
Putative Polycomb group protein ASXL2
DEG_SPOP_SBC_1
1333:1337
VSTSS
SPOP
0.961
More...
Q7L1W4
Volume-regulated anion channel subunit LRRC8D
DEG_SPOP_SBC_1
238:242
VSTSS
SPOP
0.6957
More...
Q86UE8
Serine/threonine-protein kinase tousled-like 2
DEG_SPOP_SBC_1
749:753
VSTSS
SPOP
0.9974
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_SPOP_SBC_1
1839:1843
VSTSS
SPOP
0.9049
More...
Q8NFU7
Methylcytosine dioxygenase TET1
DEG_SPOP_SBC_1
569:573
VSTSS
SPOP
0.9917
More...
Q8TF72
Protein Shroom3
DEG_SPOP_SBC_1
815:819
VSTSS
SPOP
0.9994
More...
Q9NZM3
Intersectin-2
DEG_SPOP_SBC_1
162:166
VSTSS
SPOP
0.9894
More...
Q9ULM3
YEATS domain-containing protein 2
DEG_SPOP_SBC_1
888:892
VSTSS
SPOP
0.9942
More...
Q9Y4D8
Probable E3 ubiquitin-protein ligase HECTD4
DEG_SPOP_SBC_1
3049:3053
VSTSS
SPOP
0.9533
More...
Q9BQE6
LBH domain-containing protein 1
DEG_SPOP_SBC_1
51:55
VSTSS
SPOP
0.5933
More...