DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VSTSS
Uniprot ID:
Q6PJT7
Source protein:
Zinc finger CCCH domain-containing protein 14
Source gene:
ZC3H14
Class:
DEG_SPOP_SBC_1
Location:
131:135
E3 ligase:
SPOP
DEGRON score:
0.9971
ASA_SCORE:
84.56
COIL:
0.8612
CONS_SCORE:
0.3693
DSS_SCORE:
0.7168
HELIX:
0.1226
FCONS_SCORE:
1.0927
RIG_SCORE:
0.5922
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N142D
TCGA-2Y-A9H7
LIHC
TCGA
VSTSS
DEG_SPOP_SBC_1
0.1389
p.N142D
DO219533
LIHC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.1389
p.A122S
TCGA-93-8067
LUAD
TCGA
VSTSS
DEG_SPOP_SBC_1
0.0833
p.A122S
DO25113
LUAD
ICGC
VSTSS
DEG_SPOP_SBC_1
0.0833
p.S135L
TCGA-AP-A1E0
UCEC
TCGA
VSTSS
DEG_SPOP_SBC_1
0.7667
p.S135L
TCGA-AX-A05Z
UCEC
TCGA
VSTSS
DEG_SPOP_SBC_1
0.7667
p.S135L
TCGA-B5-A11N
UCEC
TCGA
VSTSS
DEG_SPOP_SBC_1
0.7667
p.S135L
TCGA-EO-A22U
UCEC
TCGA
VSTSS
DEG_SPOP_SBC_1
0.7667
p.S135L
TCGA-EO-A22X
UCEC
TCGA
VSTSS
DEG_SPOP_SBC_1
0.7667
p.S135L
DO40884
UCEC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.7667
p.S135L
DO43154
UCEC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.7667
p.S135L
DO43907
UCEC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.7667
p.S135L
DO43755
UCEC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.7667
p.S135L
DO41458
UCEC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.7667
p.A122E
TCGA-B0-4700
KIRC
TCGA
VSTSS
DEG_SPOP_SBC_1
0.0833
p.A122E
DO16961
KIRC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.0833
p.Q136P
TCGA-L9-A443
LUAD
TCGA
VSTSS
DEG_SPOP_SBC_1
0.3056
p.Q136P
DO24285
LUAD
ICGC
VSTSS
DEG_SPOP_SBC_1
0.3056
p.P143Q
DO47407
SKCM
ICGC
VSTSS
DEG_SPOP_SBC_1
0.1111
p.E127V
DO229275
THCA
ICGC
VSTSS
DEG_SPOP_SBC_1
0.2222
p.V126I
DO41235
UCEC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.6389
p.Q134K
DO41235
UCEC
ICGC
VSTSS
DEG_SPOP_SBC_1
0.6944
p.R144I
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
VSTSS
DEG_SPOP_SBC_1
0.0833
p.R144I
NCI-H2342
lung
COSMIC
VSTSS
DEG_SPOP_SBC_1
0.0833
p.L144W
PA-1
ovary
COSMIC
VSTSS
DEG_SPOP_SBC_1
0.0833
p.V144I
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
VSTSS
DEG_SPOP_SBC_1
0.0833
p.D133N
NCI-H650
lung
COSMIC
VSTSS
DEG_SPOP_SBC_1
0.6932
Drug responses associated with ZC3H14 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35716
Transcription factor SOX-11
DEG_SPOP_SBC_1
339:343
VSTSS
SPOP
0.9784
More...
P42684
Tyrosine-protein kinase ABL2
DEG_SPOP_SBC_1
816:820
VSTSS
SPOP
0.9961
More...
P54259
Atrophin-1
DEG_SPOP_SBC_1
38:42
VSTSS
SPOP
0.9947
More...
P57768
Sorting nexin-16
DEG_SPOP_SBC_1
33:37
VSTSS
SPOP
0.9979
More...
Q14149
MORC family CW-type zinc finger protein 3
DEG_SPOP_SBC_1
872:876
VSTSS
SPOP
0.9439
More...
Q68DE3
Basic helix-loop-helix domain-containing protein USF3
DEG_SPOP_SBC_1
776:780
VSTSS
SPOP
0.6894
More...
Q6PJT7
Zinc finger CCCH domain-containing protein 14
DEG_SPOP_SBC_1
131:135
VSTSS
SPOP
0.9971
More...
Q76L83
Putative Polycomb group protein ASXL2
DEG_SPOP_SBC_1
1333:1337
VSTSS
SPOP
0.961
More...
Q7L1W4
Volume-regulated anion channel subunit LRRC8D
DEG_SPOP_SBC_1
238:242
VSTSS
SPOP
0.6957
More...
Q86UE8
Serine/threonine-protein kinase tousled-like 2
DEG_SPOP_SBC_1
749:753
VSTSS
SPOP
0.9974
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_SPOP_SBC_1
1839:1843
VSTSS
SPOP
0.9049
More...
Q8NFU7
Methylcytosine dioxygenase TET1
DEG_SPOP_SBC_1
569:573
VSTSS
SPOP
0.9917
More...
Q8TF72
Protein Shroom3
DEG_SPOP_SBC_1
815:819
VSTSS
SPOP
0.9994
More...
Q9NZM3
Intersectin-2
DEG_SPOP_SBC_1
162:166
VSTSS
SPOP
0.9894
More...
Q9ULM3
YEATS domain-containing protein 2
DEG_SPOP_SBC_1
888:892
VSTSS
SPOP
0.9942
More...
Q9Y4D8
Probable E3 ubiquitin-protein ligase HECTD4
DEG_SPOP_SBC_1
3049:3053
VSTSS
SPOP
0.9533
More...
Q9BQE6
LBH domain-containing protein 1
DEG_SPOP_SBC_1
51:55
VSTSS
SPOP
0.5933
More...